Basic Information:

  VIRBase ID:  

VHID00595734

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m21-1:  MIMAT0005540          Slc33a1:  NM_015728     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m21-1	Slc33a1
miRBase Accession/Entrez ID	MIMAT0005540	11416
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	Ac//Acatn//AI315656//AI788741//D630022N01Rik

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Slc33a1	chr3:63943232-63943233(-) m6A 3'UTR       24981863//26404942 chr3:63943255-63943256(-) m6A CDS       24981863//26404942 chr3:63943281-63943282(-) m6A CDS       24981863//26404942 chr3:63963526-63963527(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:63963609-63963610(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:63963673-63963674(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:63963702-63963703(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:63963783-63963784(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:63963977-63963978(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:63964047-63964048(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:63964068-63964069(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:63964164-63964165(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:63964246-63964247(-) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:63964251-63964252(-) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:63964258-63964259(-) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:63964268-63964269(-) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:63964293-63964294(-) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:63964333-63964334(-) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:63964484-63964485(-) m6A 5'UTR       25456834//25412662//24981863//25569111//22608085//22575960 chr3:63964614-63964615(-) m6A 5'UTR       25456834//24981863//25412662//25569111 chr3:63964631-63964632(-) m6A 5'UTR       24981863//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Slc33a1	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m21-1
Interactor2: Slc33a1

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar