Basic Information:

  VIRBase ID:  

VHID00595688

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-4-5p:  MIMAT0005538          Slc26a11:  NM_178743     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-4-5p	Slc26a11
miRBase Accession/Entrez ID	MIMAT0005538	268512
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	F630021I08Rik

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Slc26a11	chr11:119355591-119355592(+) m6A 5'UTR//exon       25569111 chr11:119355615-119355616(+) m6A 5'UTR//exon       25569111 chr11:119356829-119356830(+) m6A 5'UTR//exon       24981863//25569111 chr11:119356860-119356861(+) m6A CDS//exon       24981863//25569111 chr11:119362229-119362230(+) Y CDS//exon//intron       26075521 chr11:119363212-119363213(+) m6A exon//intron       25683224 chr11:119363245-119363246(+) m6A exon//intron       25683224//25412662 chr11:119368804-119368805(+) m6A CDS//exon//intron       25569111 chr11:119368812-119368813(+) m6A CDS//exon//intron       25569111 chr11:119377763-119377764(+) m6A CDS//exon       25412662 chr11:119377783-119377784(+) m6A CDS//exon       25412662 chr11:119380203-119380204(+) m6A CDS//exon       25412662 chr11:119380210-119380211(+) m6A CDS//exon       25412662

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Slc26a11	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-4-5p
Interactor2: Slc26a11

Evidence Support:

Prediction-Evidence	Rep
Support Database	RepTar