Basic Information:

  VIRBase ID:  

VHID00595244

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-3-5p:  MIMAT0005536          Col8a2:  NM_199473     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-3-5p	Col8a2
miRBase Accession/Entrez ID	MIMAT0005536	329941
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	AI429819

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Col8a2	chr4:126286847-126286848(+) m6A 5'UTR       25569111 chr4:126309752-126309753(+) m6A CDS       25569111 chr4:126309761-126309762(+) m6A CDS       25569111 chr4:126310406-126310407(+) m6A CDS       25569111 chr4:126310443-126310444(+) m6A CDS       25569111 chr4:126310482-126310483(+) m6A CDS       25569111 chr4:126310497-126310498(+) m6A CDS       25569111 chr4:126310512-126310513(+) m6A CDS       25569111 chr4:126310845-126310846(+) m6A CDS       25569111 chr4:126311421-126311422(+) m6A CDS       25569111 chr4:126311439-126311440(+) m6A CDS       25569111 chr4:126311448-126311449(+) m6A CDS       25569111 chr4:126311733-126311734(+) m6A CDS       25569111 chr4:126311800-126311801(+) m6A CDS       25569111 chr4:126311974-126311975(+) m6A CDS       24981863//25569111 chr4:126312104-126312105(+) m6A CDS       24981863//25569111//22608085 chr4:126312155-126312156(+) m6A CDS       24981863//25569111//22608085 chr4:126312350-126312351(+) m6A 3'UTR       25569111 chr4:126312388-126312389(+) m6A 3'UTR       24981863//25569111 chr4:126312401-126312402(+) m6A 3'UTR       24981863//25569111 chr4:126312438-126312439(+) m6A 3'UTR       24981863//25569111 chr4:126312535-126312536(+) m6A 3'UTR       24981863//25569111 chr4:126312771-126312772(+) m6A 3'UTR       25569111 chr4:126312824-126312825(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr4:126312840-126312841(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr4:126312862-126312863(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr4:126312899-126312900(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr4:126312979-126312980(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr4:126312998-126312999(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr4:126313038-126313039(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr4:126313054-126313055(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr4:126313114-126313115(+) m6A 3'UTR       24981863//25569111 chr4:126313142-126313143(+) m6A 3'UTR       24981863//25569111 chr4:126313597-126313598(+) m6A 3'UTR       25569111 chr4:126313718-126313719(+) m6A 3'UTR       25569111 chr4:126313757-126313758(+) m6A 3'UTR       25569111 chr4:126313784-126313785(+) m6A 3'UTR       25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-3-5p
Interactor2: Col8a2

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar