Basic Information:

  VIRBase ID:  

VHID00595205

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-3-5p:  MIMAT0005536          Mysm1:  NM_177239     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-3-5p	Mysm1
miRBase Accession/Entrez ID	MIMAT0005536	320713
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	C130067A03Rik//C530050H10Rik

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Mysm1	chr4:94942698-94942699(-) m6A 3'UTR//exon       24981863 chr4:94942703-94942704(-) m6A 3'UTR//exon       24981863 chr4:94942708-94942709(-) m6A 3'UTR//exon       24981863 chr4:94942721-94942722(-) m6A 3'UTR//exon       24981863 chr4:94942729-94942730(-) m6A 3'UTR//exon       24981863 chr4:94942734-94942735(-) m6A 3'UTR//exon       24981863 chr4:94942755-94942756(-) m6A 3'UTR//exon       24981863 chr4:94944732-94944733(-) m6A 3'UTR//exon       25412662 chr4:94944767-94944768(-) m6A 3'UTR//exon       25412662//24981863 chr4:94944777-94944778(-) m6A 3'UTR//exon       25412662//24981863 chr4:94944787-94944788(-) m6A 3'UTR//exon       25412662//24981863 chr4:94944793-94944794(-) m6A 3'UTR//exon       25412662//24981863 chr4:94944799-94944800(-) m6A 3'UTR//exon       25412662//24981863 chr4:94944842-94944843(-) m6A 3'UTR//exon       25412662//24981863 chr4:94944852-94944853(-) m6A 3'UTR//exon       25412662//24981863 chr4:94944880-94944881(-) m6A 3'UTR//exon       25412662 chr4:94944896-94944897(-) m6A 3'UTR//exon       25412662 chr4:94947003-94947004(-) m6A CDS//exon       25456834 chr4:94952277-94952278(-) m6A CDS//exon       22608085 chr4:94952292-94952293(-) m6A CDS//exon       22608085 chr4:94952323-94952324(-) m6A CDS//exon       22608085 chr4:94957087-94957088(-) m6A CDS       25412662//22608085 chr4:94958924-94958925(-) m6A CDS       25412662//22608085 chr4:94958934-94958935(-) m6A CDS       25412662//22608085 chr4:94958952-94958953(-) m6A CDS       25412662//22608085 chr4:94964970-94964971(-) m6A exon//intron       25569111 chr4:94964981-94964982(-) m6A exon//intron       25569111 chr4:94965146-94965147(-) m6A CDS//exon       25456834//25412662//24981863//25569111 chr4:94965174-94965175(-) m6A CDS//exon       25456834//25412662//24981863//25569111 chr4:94965180-94965181(-) m6A CDS//exon       25456834//25412662//24981863//25569111 chr4:94965259-94965260(-) m6A CDS//exon       25456834//25412662//24981863//25569111 chr4:94965290-94965291(-) m6A CDS//exon       25456834//25412662//24981863//25569111//22608085 chr4:94965341-94965342(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr4:94965415-94965416(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr4:94965458-94965459(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr4:94965478-94965479(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr4:94965663-94965664(-) m6A CDS//exon       24981863//25569111 chr4:94965770-94965771(-) Y CDS//exon       26075521 chr4:94965806-94965807(-) m6A CDS//exon       25683224//24981863//25456834 chr4:94965846-94965847(-) m6A CDS//exon       25683224//24981863//25456834 chr4:94967887-94967888(-) m6A CDS//exon       24981863 chr4:94967946-94967947(-) m6A CDS//exon       - chr4:94968982-94968983(-) m6A CDS//exon//intron       - chr4:94968988-94968989(-) m6A CDS//exon//intron       - chr4:94969014-94969015(-) m6A CDS//exon//intron       - chr4:94969039-94969040(-) m6A CDS//exon//intron       - chr4:94972953-94972954(-) m6A CDS//exon       25569111 chr4:94972981-94972982(-) m6A CDS//exon       25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-3-5p
Interactor2: Mysm1

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar