Detail Information

Basic Information:


  VIRBase ID:  

VHID00594961

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-3-5p:           Raver2:      

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Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-m01-3-5p Raver2
miRBase
Accession/Entrez ID
MIMAT0005536 242570
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - A430091O22Rik

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Raver2
chr4:101102770-101102771(+) m6A CDS//exon       25683224//24981863
chr4:101102871-101102872(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085
chr4:101102890-101102891(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085
chr4:101103001-101103002(+) m6A CDS//exon       25683224//25456834//24981863//25569111
chr4:101120484-101120485(+) m6A CDS       25683224//22608085
chr4:101120516-101120517(+) m6A CDS       25683224//22608085
chr4:101133626-101133627(+) m6A CDS       25683224//22608085
chr4:101133936-101133937(+) m6A CDS       25683224//22608085
chr4:101133943-101133944(+) m6A CDS       25683224//22608085
chr4:101136223-101136224(+) m6A CDS       25683224//22608085
chr4:101137728-101137729(+) m6A CDS       25683224//22608085
chr4:101137745-101137746(+) m6A CDS       25683224//22608085
chr4:101139123-101139124(+) m6A CDS       25683224//22608085
chr4:101150592-101150593(+) m6A 3'UTR       25683224//24981863
chr4:101150641-101150642(+) m6A 3'UTR       25683224//24981863
chr4:101150701-101150702(+) m6A 3'UTR       25683224//24981863

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-m01-3-5p
Interactor2: Raver2

Evidence Support:


Prediction-Evidence Rep
Support Database RepTar

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