Basic Information:

  VIRBase ID:  

VHID00594698

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-3-5p:  MIMAT0005536          Slc25a25:  NM_001164358     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-3-5p	Slc25a25
miRBase Accession/Entrez ID	MIMAT0005536	227731
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	1110030N17Rik//MCSC//mKIAA1896

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Slc25a25	chr2:32414729-32414730(-) m6A 3'UTR       25683224//25456834//25412662//24981863//22575960 chr2:32414737-32414738(-) m6A 3'UTR       25683224//25456834//25412662//24981863//22575960 chr2:32414818-32414819(-) m6A 3'UTR       25683224//25456834//25412662//24981863 chr2:32414874-32414875(-) m6A 3'UTR       25683224//25412662 chr2:32414897-32414898(-) m6A 3'UTR       25683224//25412662//22608085 chr2:32414969-32414970(-) m6A 3'UTR       25683224//22608085 chr2:32415167-32415168(-) m6A 3'UTR       25683224//25412662//24981863//25569111 chr2:32415257-32415258(-) m6A 3'UTR       25683224//25412662//24981863//25456834//25569111//22575960 chr2:32415266-32415267(-) m6A 3'UTR       25683224//25412662//24981863//25456834//25569111//22575960 chr2:32415416-32415417(-) m6A 3'UTR       25683224//25412662//24981863//25569111//22575960 chr2:32415473-32415474(-) m6A 3'UTR       25683224//25412662//24981863//25569111//22575960 chr2:32415482-32415483(-) m6A 3'UTR       25683224//25412662//24981863//25569111//22575960 chr2:32415489-32415490(-) m6A 3'UTR       25683224//25412662//24981863//25569111//22575960 chr2:32415632-32415633(-) m6A 3'UTR       25683224//22608085 chr2:32415663-32415664(-) m6A 3'UTR       25683224//22608085 chr2:32415805-32415806(-) m6A 3'UTR       25683224//24981863//25569111 chr2:32415884-32415885(-) m6A 3'UTR       25683224//24981863//25569111 chr2:32415942-32415943(-) m6A 3'UTR       25683224//25456834//24981863//25569111 chr2:32415966-32415967(-) m6A 3'UTR       25683224//25456834//24981863//25569111 chr2:32416033-32416034(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:32416122-32416123(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:32416171-32416172(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:32416262-32416263(-) m6A CDS//exon       25683224//24981863//25569111//22575960 chr2:32416275-32416276(-) m6A CDS//exon       25683224//24981863//25569111//22575960 chr2:32416512-32416513(-) m6A CDS//exon       25683224//22608085 chr2:32416521-32416522(-) m6A CDS//exon       25683224//22608085 chr2:32416558-32416559(-) m6A CDS//exon       25683224//22608085 chr2:32417203-32417204(-) m6A CDS//exon       25683224//22608085 chr2:32417223-32417224(-) m6A CDS//exon       25683224//22608085 chr2:32417228-32417229(-) m6A CDS//exon       25683224//22608085 chr2:32417249-32417250(-) m6A CDS//exon       25683224//22608085 chr2:32419069-32419070(-) m6A CDS//exon       25683224//25412662 chr2:32419088-32419089(-) m6A CDS//exon       25683224//25412662 chr2:32420341-32420342(-) m6A CDS//exon       25683224//25412662//22608085 chr2:32420368-32420369(-) m6A CDS//exon       25683224//25412662//22608085 chr2:32421328-32421329(-) m6A CDS       25683224//25412662//22608085 chr2:32421350-32421351(-) m6A CDS       25683224//25412662//22608085 chr2:32421486-32421487(-) m6A 5'UTR//CDS       25683224//22608085 chr2:32421512-32421513(-) m6A 5'UTR//CDS       25683224//22608085 chr2:32421555-32421556(-) m6A 5'UTR//CDS       25683224//22608085 chr2:32421573-32421574(-) m6A 5'UTR//CDS       25683224//22608085 chr2:32430631-32430632(-) m6A CDS//exon//intron       25683224//24981863 chr2:32430688-32430689(-) m6A CDS//exon//intron       25683224//24981863//25569111 chr2:32430737-32430738(-) m6A CDS//exon//intron       25683224//24981863//25569111//22608085 chr2:32430816-32430817(-) m6A 5'UTR//exon//intron       25683224//24981863//25569111 chr2:32430834-32430835(-) m6A 5'UTR//exon//intron       25683224//24981863//25569111 chr2:32430843-32430844(-) m6A 5'UTR//exon//intron       25683224//24981863//25569111 chr2:32430876-32430877(-) m6A 5'UTR//exon//intron       25683224//24981863//25569111 chr2:32431030-32431031(-) m6A 5'UTR//CDS//exon//intron       25683224//24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Slc25a25	Cytoplasm Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-3-5p
Interactor2: Slc25a25

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar