Detail Information

Basic Information:


  VIRBase ID:  

VHID00594327

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-3-5p:           Cyb5d2:      

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Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-m01-3-5p Cyb5d2
miRBase
Accession/Entrez ID
MIMAT0005536 192986
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - 9330151E16Rik//Gm2//neufe

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Cyb5d2
chr11:72778074-72778075(-) m6A 3'UTR       25456834//24981863//25569111//22608085
chr11:72778150-72778151(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr11:72778181-72778182(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr11:72778196-72778197(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr11:72778214-72778215(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr11:72778320-72778321(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr11:72778345-72778346(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr11:72778414-72778415(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr11:72778425-72778426(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr11:72778482-72778483(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr11:72778492-72778493(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr11:72778529-72778530(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr11:72778583-72778584(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr11:72778630-72778631(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr11:72778704-72778705(-) m6A 3'UTR       25456834//24981863//25569111//22608085
chr11:72778805-72778806(-) m6A CDS       25683224//25456834//24981863//25569111//22608085
chr11:72778811-72778812(-) m6A CDS       25683224//25456834//24981863//25569111//22608085
chr11:72778828-72778829(-) m6A CDS       25683224//25456834//24981863//25569111//22608085
chr11:72778838-72778839(-) m6A CDS       25683224//25456834//24981863//25569111//22608085
chr11:72778866-72778867(-) m6A CDS       25683224//25456834//24981863//25569111//22608085
chr11:72778934-72778935(-) m6A CDS//exon       25683224//25412662//24981863//25569111
chr11:72782730-72782731(-) m6A CDS//intron       25683224//24981863
chr11:72782736-72782737(-) m6A CDS//intron       25683224//24981863
chr11:72795607-72795608(-) m6A CDS//exon//intron       25412662
chr11:72795682-72795683(-) m6A CDS//exon//intron       25412662//24981863

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-m01-3-5p
Interactor2: Cyb5d2

Evidence Support:


Prediction-Evidence cRep
Support Database RepTar

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