Basic Information:

  VIRBase ID:  

VHID00594126

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-3-5p:  MIMAT0005536          Txndc5:  NM_145367     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-3-5p	Txndc5
miRBase Accession/Entrez ID	MIMAT0005536	105245
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	AL022641//ERp//ERp46//PC-//PC-TRP

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Txndc5	chr13:38500288-38500289(-) m6A 3'UTR//exon       24981863//22575960 chr13:38500326-38500327(-) m6A 3'UTR//exon       24981863//25569111//22608085//22575960 chr13:38500391-38500392(-) m6A 3'UTR//exon       24981863//25456834//25569111//26404942//22608085//22575960 chr13:38500471-38500472(-) m6A 3'UTR//exon       24981863//25456834//25569111//26404942//22608085//22575960 chr13:38500489-38500490(-) m6A 3'UTR//exon       24981863//25456834//25569111//26404942//22608085//22575960 chr13:38500494-38500495(-) m6A 3'UTR//exon       24981863//25456834//25569111//26404942//22608085//22575960 chr13:38500501-38500502(-) m6A 3'UTR//exon       24981863//25456834//25569111//26404942//22608085//22575960 chr13:38500586-38500587(-) m6A 3'UTR//exon       24981863//25569111 chr13:38500740-38500741(-) m6A 3'UTR//exon       24981863//25569111//26404942//22575960 chr13:38500747-38500748(-) m6A 3'UTR//exon       24981863//25569111//26404942//22575960 chr13:38500864-38500865(-) m6A 3'UTR//exon       24981863//25569111 chr13:38500904-38500905(-) m6A 3'UTR//exon       25569111 chr13:38501163-38501164(-) m6A 3'UTR//exon       25456834//24981863//25569111//22608085 chr13:38501269-38501270(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960 chr13:38501296-38501297(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960 chr13:38501401-38501402(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960 chr13:38501442-38501443(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960 chr13:38501534-38501535(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr13:38501581-38501582(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//26404942//22575960 chr13:38501591-38501592(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//26404942//22575960 chr13:38501637-38501638(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//26404942//22575960 chr13:38501654-38501655(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//26404942 chr13:38503467-38503468(-) m6A CDS//exon       25569111 chr13:38504768-38504769(-) m6A CDS//exon       25412662 chr13:38504958-38504959(-) m6A exon//intron       25412662 chr13:38505881-38505882(-) m6A exon//intron       25412662 chr13:38505914-38505915(-) m6A exon//intron       25412662 chr13:38505921-38505922(-) m6A exon//intron       25412662 chr13:38507001-38507002(-) m6A CDS       25412662//22608085 chr13:38507045-38507046(-) m6A CDS       25412662//22608085 chr13:38507063-38507064(-) m6A CDS       25412662//22608085 chr13:38510143-38510144(-) m6A CDS       22608085 chr13:38510153-38510154(-) m6A CDS       22608085 chr13:38513119-38513120(-) m6A CDS       25683224//25412662//22608085 chr13:38513143-38513144(-) m6A CDS       25683224//25412662//22608085 chr13:38519002-38519003(-) m6A CDS       25683224//25412662//22608085 chr13:38519016-38519017(-) m6A CDS       25683224//25412662//22608085 chr13:38519026-38519027(-) m6A CDS       25683224//25412662//22608085 chr13:38519034-38519035(-) m6A CDS       25683224//25412662//22608085 chr13:38519066-38519067(-) m6A CDS       25683224//25412662//22608085 chr13:38523382-38523383(-) m6A CDS       25683224//25412662 chr13:38523430-38523431(-) m6A 5'UTR//CDS       25412662 chr13:38523471-38523472(-) m6A 5'UTR//CDS       25412662 chr13:38527740-38527741(-) m6A 5'UTR//intron       25412662//25569111 chr13:38527746-38527747(-) m6A 5'UTR//intron       25412662//25569111 chr13:38528274-38528275(-) m6A CDS//intron       25412662//25569111 chr13:38528292-38528293(-) m6A CDS//intron       25412662//25569111 chr13:38528445-38528446(-) m6A 5'UTR//intron       25412662//24981863//25456834//25569111 chr13:38528565-38528566(-) m6A 5'UTR       25412662//24981863//25569111 chr13:38528602-38528603(-) m6A 5'UTR       25412662 chr13:38528610-38528611(-) m6A 5'UTR       25412662 chr13:38528646-38528647(-) m6A 5'UTR       25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Txndc5	Exosome Mast cells     17486113

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-3-5p
Interactor2: Txndc5

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar