Basic Information:

  VIRBase ID:  

VHID00593844

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-3-5p:  MIMAT0005536          Ppp1r11:  NM_029632     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-3-5p	Ppp1r11
miRBase Accession/Entrez ID	MIMAT0005536	76497
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	1500041B02Rik//AV117883//HCG//HCG-//Hcgv//Tcte5//Tctex-5//Tctex5

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Ppp1r11	chr17:36948687-36948688(-) m6A 3'UTR       25456834 chr17:36948749-36948750(-) m6A 3'UTR       25456834 chr17:36949180-36949181(-) m6A 3'UTR       24981863 chr17:36949294-36949295(-) m6A 3'UTR       24981863//25456834//25569111//22608085 chr17:36949366-36949367(-) m6A CDS       25412662//24981863//25456834//25569111//22608085 chr17:36949487-36949488(-) m1A CDS       26863196 chr17:36949908-36949909(-) m6A CDS       24981863//25569111//22608085 chr17:36949961-36949962(-) m6A CDS       24981863//25569111//22608085 chr17:36951002-36951003(-) m6A CDS//intron       24981863//22608085 chr17:36951329-36951330(-) m6A 5'UTR//intron       25569111//22608085 chr17:36951433-36951434(-) m6A CDS       25569111//22608085 chr17:36951448-36951449(-) m6A CDS       25569111//22608085 chr17:36951463-36951464(-) m6A CDS       25569111//22608085 chr17:36951475-36951476(-) m6A CDS       25569111//22608085 chr17:36951496-36951497(-) m6A CDS       25569111//22608085 chr17:36951675-36951676(-) m6A 5'UTR//intron       25683224//24981863//25456834//25569111 chr17:36951731-36951732(-) m6A 5'UTR       25683224//24981863//25456834

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-3-5p
Interactor2: Ppp1r11

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar