Basic Information:

  VIRBase ID:  

VHID00593691

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-3-5p:  MIMAT0005536          Herc3:  NM_001361966     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-3-5p	Herc3
miRBase Accession/Entrez ID	MIMAT0005536	73998
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	5730409F18Rik//AI646603//mKIAA0032

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Herc3	chr6:58849927(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Herc3	chr6:58899933(+) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Herc3	chr6:58831551-58831552(+) m6A 5'UTR       24981863//25569111 chr6:58831630-58831631(+) m6A 5'UTR       25412662//24981863//25569111 chr6:58831874-58831875(+) m6A 5'UTR//intron       25412662 chr6:58832478-58832479(+) m6A 5'UTR//intron       25683224//22608085 chr6:58832527-58832528(+) m6A 5'UTR//intron       25683224//22608085 chr6:58833717-58833718(+) m6A 5'UTR//intron       25683224//22608085 chr6:58855749-58855750(+) m6A CDS       25683224//22608085 chr6:58855754-58855755(+) m6A CDS       25683224//22608085 chr6:58855762-58855763(+) m6A CDS       25683224//22608085 chr6:58856619-58856620(+) m6A CDS       25683224//22608085 chr6:58856629-58856630(+) m6A CDS       25683224//22608085 chr6:58856638-58856639(+) m6A CDS       25683224//22608085 chr6:58856663-58856664(+) m6A CDS       25683224//22608085 chr6:58902020-58902021(+) m6A exon//intron       22608085 chr6:58902036-58902037(+) m6A exon//intron       22608085 chr6:58902055-58902056(+) m6A exon//intron       25456834//22608085 chr6:58902102-58902103(+) m6A exon//intron       25456834//22608085 chr6:58902133-58902134(+) m6A 3'UTR//exon//intron       25683224//25456834//22608085 chr6:58902177-58902178(+) m6A 3'UTR//exon//intron       25683224//25456834 chr6:58902541-58902542(+) m6A 3'UTR//exon//intron       25569111 chr6:58919187-58919188(+) m6A 3'UTR       24981863//22608085 chr6:58919385-58919386(+) m6A 3'UTR       24981863//22608085 chr6:58919451-58919452(+) m6A 3'UTR       24981863//22608085 chr6:58919460-58919461(+) m6A 3'UTR       24981863//22608085 chr6:58919504-58919505(+) m6A 3'UTR       24981863//22608085 chr6:58919514-58919515(+) m6A 3'UTR       24981863//22608085 chr6:58919570-58919571(+) m6A 3'UTR       24981863//22608085 chr6:58919655-58919656(+) m6A 3'UTR       24981863//22608085 chr6:58920153-58920154(+) Y 3'UTR//exon       26075521

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-3-5p
Interactor2: Herc3

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar