Basic Information:

  VIRBase ID:  

VHID00593598

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-3-5p:  MIMAT0005536          Pex13:  NM_023651     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-3-5p	Pex13
miRBase Accession/Entrez ID	MIMAT0005536	72129
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	2610008O20Rik

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Pex13	chr11:23648849-23648850(-) m6A 3'UTR       25456834 chr11:23648886-23648887(-) m6A 3'UTR       25456834//24981863//25569111 chr11:23648987-23648988(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr11:23648995-23648996(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr11:23649011-23649012(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr11:23649089-23649090(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr11:23649098-23649099(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr11:23649264-23649265(-) m6A 3'UTR       24981863//25569111 chr11:23649307-23649308(-) m6A CDS       24981863//25569111 chr11:23649353-23649354(-) m6A CDS       24981863//25569111 chr11:23649387-23649388(-) m6A CDS       24981863//25569111//22608085 chr11:23649479-23649480(-) m6A 3'UTR//CDS       24981863//25569111 chr11:23649531-23649532(-) m6A 3'UTR//CDS       24981863//25569111 chr11:23649539-23649540(-) m6A 3'UTR//CDS       24981863//25569111 chr11:23655466-23655467(-) m6A CDS//intron       24981863//25456834//25569111//22608085 chr11:23655548-23655549(-) m6A CDS//intron       25683224//25456834//24981863//25569111//22608085//22575960 chr11:23655573-23655574(-) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr11:23655596-23655597(-) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr11:23655663-23655664(-) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr11:23656006-23656007(-) m6A CDS//exon//intron       24981863//25569111 chr11:23656016-23656017(-) m6A CDS//exon//intron       24981863//25569111 chr11:23656035-23656036(-) m6A CDS//exon//intron       25569111 chr11:23656090-23656091(-) m6A CDS//exon//intron       25569111 chr11:23656096-23656097(-) m6A CDS//exon//intron       25569111 chr11:23656456-23656457(-) m6A exon//intron       25569111 chr11:23665422-23665423(-) m6A exon//intron       25683224//25412662 chr11:23665489-23665490(-) m6A exon//intron       25683224//25412662 chr11:23665504-23665505(-) m6A exon//intron       25683224//25412662 chr11:23665814-23665815(-) m6A CDS//exon       25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Pex13	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-3-5p
Interactor2: Pex13

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar