Basic Information:

  VIRBase ID:  

VHID00593579

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-3-5p:  MIMAT0005536          Nkiras2:  NM_028024     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-3-5p	Nkiras2
miRBase Accession/Entrez ID	MIMAT0005536	71966
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	2410003M04Rik//4930527H08Rik//D630018G21Rik//KBR//KBRAS2

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Nkiras2	chr11:100619339-100619340(+) m6A 5'UTR       25412662 chr11:100619346-100619347(+) m6A 5'UTR       25412662 chr11:100619616-100619617(+) m6A 5'UTR       25683224//25412662//24981863//25569111 chr11:100619700-100619701(+) m6A 5'UTR       25456834//25412662//24981863//25569111 chr11:100622888-100622889(+) m6A 5'UTR//intron       25412662//24981863//25569111 chr11:100622999-100623000(+) m6A 5'UTR//exon//intron       25683224//25412662//24981863//25569111 chr11:100626343-100626344(+) m6A 3'UTR//exon       24981863//25569111 chr11:100626411-100626412(+) m6A 3'UTR//exon       24981863//25569111 chr11:100626495-100626496(+) m6A 3'UTR//exon       24981863//25569111 chr11:100626886-100626887(+) m6A 3'UTR       25569111 chr11:100626896-100626897(+) m6A 3'UTR       25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Nkiras2	Cytoplasm Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-3-5p
Interactor2: Nkiras2

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar