Detail Information

Basic Information:


  VIRBase ID:  

VHID00593240

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-3-5p:           Parp6:      

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Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-m01-3-5p Parp6
miRBase
Accession/Entrez ID
MIMAT0005536 67287
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - 1700119G14Rik//2310028P13Rik//3110038K10Rik//ARTD17//C030013N01Rik//PARP-6

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Parp6
chr9:59618590-59618591(+) m6A 5'UTR       24981863//22608085
chr9:59618604-59618605(+) m6A 5'UTR       24981863//22608085
chr9:59618674-59618675(+) m6A 5'UTR       25569111//22608085
chr9:59649967-59649968(+) m6A 3'UTR//CDS       24981863//26404942//22608085
chr9:59650005-59650006(+) m6A 3'UTR//CDS       24981863//26404942//22608085
chr9:59650021-59650022(+) m6A 3'UTR//CDS       24981863//26404942//22608085
chr9:59650085-59650086(+) m6A 3'UTR       25456834//24981863//25569111//26404942//22608085
chr9:59650118-59650119(+) m6A 3'UTR       25456834//24981863//25569111//26404942//22608085
chr9:59650177-59650178(+) m6A 3'UTR       25456834//24981863//22608085
chr9:59650255-59650256(+) m6A 3'UTR       24981863//22608085
chr9:59650279-59650280(+) m6A 3'UTR       24981863//22608085

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-m01-3-5p
Interactor2: Parp6

Evidence Support:


Prediction-Evidence cRep
Support Database RepTar

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