Basic Information:

  VIRBase ID:  

VHID00593228

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-3-5p:  MIMAT0005536          Arl8b:  NM_026011     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-3-5p	Arl8b
miRBase Accession/Entrez ID	MIMAT0005536	67166
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	2610313E07Rik//3100002J04Rik//Arl//Arl10c//gie1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Arl8b	chr6:108783282-108783283(+) m6A CDS       25569111//22608085 chr6:108783319-108783320(+) m6A CDS       25569111//22608085 chr6:108821553-108821554(+) m6A 3'UTR       24981863//22608085 chr6:108821595-108821596(+) m6A 3'UTR       24981863//22608085 chr6:108821627-108821628(+) m6A 3'UTR       24981863//22608085 chr6:108821643-108821644(+) m6A 3'UTR       24981863//22608085 chr6:108821953-108821954(+) m6A 3'UTR       24981863//22608085 chr6:108822000-108822001(+) m6A 3'UTR       24981863//22608085 chr6:108822030-108822031(+) m6A 3'UTR       24981863//26404942//22608085 chr6:108822072-108822073(+) m6A 3'UTR       24981863//22608085 chr6:108823000-108823001(+) m6A 3'UTR       24981863//26404942//22608085 chr6:108823018-108823019(+) m6A 3'UTR       24981863//26404942//22608085 chr6:108823027-108823028(+) m6A 3'UTR       24981863//26404942//22608085 chr6:108823093-108823094(+) m6A 3'UTR       24981863//26404942//22608085 chr6:108823529-108823530(+) m6A 3'UTR       25456834//24981863//25569111 chr6:108823593-108823594(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr6:108823601-108823602(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr6:108823642-108823643(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr6:108823692-108823693(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr6:108823703-108823704(+) m6A 3'UTR       25683224//25456834//24981863 chr6:108825012-108825013(+) m6A 3'UTR       24981863 chr6:108825039-108825040(+) m6A 3'UTR       24981863 chr6:108825086-108825087(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Arl8b	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-3-5p
Interactor2: Arl8b

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar