Basic Information:

  VIRBase ID:  

VHID00593118

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-3-5p:  MIMAT0005536          Thoc7:  NM_001359900     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-3-5p	Thoc7
miRBase Accession/Entrez ID	MIMAT0005536	66231
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	Nif3l1bp1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Thoc7	chr14:14792245(-) A-I      intronic chr14:14792255(-) A-I      intronic chr14:14792235(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Thoc7	chr14:13959721(-) A-I intron -    22524474 chr14:13959731(-) A-I intron -    22524474 chr14:13959741(-) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Thoc7	chr14:13949231-13949232(-) m6A 3'UTR       24981863//26404942//22608085 chr14:13949254-13949255(-) m6A 3'UTR       24981863//26404942//22608085 chr14:13949272-13949273(-) m6A CDS       24981863//26404942//22608085 chr14:13950140-13950141(-) m6A CDS       24981863//26404942 chr14:13950150-13950151(-) m6A CDS       24981863//26404942 chr14:13950183-13950184(-) m6A CDS       24981863 chr14:13951212-13951213(-) m6A CDS       24981863 chr14:13951223-13951224(-) m6A CDS       24981863 chr14:13953476-13953477(-) m6A CDS       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Thoc7	Nucleus Neuroblastoma cell line (N2A)     22406755 Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-3-5p
Interactor2: Thoc7

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar