Basic Information:

  VIRBase ID:  

VHID00593051

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-3-5p:  MIMAT0005536          Pcbp4:  NM_021567     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-3-5p	Pcbp4
miRBase Accession/Entrez ID	MIMAT0005536	59092
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	1200003L19Rik//Alph//AlphaCP-4

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Pcbp4	chr9:106453410-106453411(+) m6A 5'UTR//exon       25412662//24981863//25569111 chr9:106453416-106453417(+) m6A 5'UTR//exon       25412662//24981863//25569111 chr9:106453427-106453428(+) m6A exon//intron       25412662//24981863//25569111 chr9:106453467-106453468(+) m6A exon//intron       25683224//25412662//24981863//25569111 chr9:106453491-106453492(+) m1A exon//intron       26863196 chr9:106453525-106453526(+) m6A exon//intron       25683224//25412662//24981863//25569111 chr9:106453550-106453551(+) m6A exon//intron       25683224//25412662//24981863//25569111 chr9:106453599-106453600(+) m6A exon//intron       25412662//25569111 chr9:106453891-106453892(+) m6A 5'UTR//exon//intron       25412662//24981863//25569111 chr9:106453950-106453951(+) m6A 5'UTR//exon       25412662//24981863//25569111//22608085 chr9:106453960-106453961(+) m6A 5'UTR//exon       25412662//24981863//25569111//22608085 chr9:106453993-106453994(+) m6A 5'UTR//exon       25412662//24981863//25569111//22608085 chr9:106454405-106454406(+) m6A exon//intron       25412662//24981863//25569111 chr9:106454411-106454412(+) m6A exon//intron       25412662//24981863//25569111 chr9:106456424-106456425(+) m6A 5'UTR//exon//intron       25412662 chr9:106460026-106460027(+) m6A 5'UTR//exon       25412662//22608085 chr9:106460405-106460406(+) m6A CDS//exon       25412662//24981863//22608085 chr9:106460425-106460426(+) m6A CDS//exon       25412662//22608085 chr9:106462362-106462363(+) m6A CDS//exon       25412662//22608085 chr9:106462381-106462382(+) m6A CDS//exon       25412662//22608085 chr9:106462589-106462590(+) m6A 3'UTR//CDS//exon       25412662//22608085 chr9:106462796-106462797(+) m6A 3'UTR//intron       25412662 chr9:106463455-106463456(+) m6A 3'UTR       24981863//25569111 chr9:106463498-106463499(+) m6A 3'UTR       24981863//25569111 chr9:106463591-106463592(+) m6A 3'UTR       24981863//25569111 chr9:106463654-106463655(+) m6A 3'UTR       25456834//24981863//25569111 chr9:106463857-106463858(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr9:106463953-106463954(+) m6A 3'UTR       25683224//24981863//25456834//25569111//22608085

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-3-5p
Interactor2: Pcbp4

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar