Detail Information

Basic Information:


  VIRBase ID:  

VHID00592902

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-3-5p:           Hs3st3b1:      

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Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-m01-3-5p Hs3st3b1
miRBase
Accession/Entrez ID
MIMAT0005536 54710
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - 3-OST-//3-OST-3B//3Ost//3OST3//3Ost3b//3OST3B1//AU041882//AW536289//HS3ST3//Hs3st3b//m3-OST-//m3-OST-3B

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Hs3st3b1
chr11:63889130-63889131(-) m6A CDS       25683224//25456834//24981863//25569111//22575960
chr11:63889245-63889246(-) m6A CDS       25683224//25456834//24981863//25569111//22575960
chr11:63889308-63889309(-) m6A CDS       25456834//24981863//25569111//22575960
chr11:63889505-63889506(-) m6A CDS       25683224//24981863//25456834//22575960
chr11:63889559-63889560(-) m6A CDS       25683224//24981863//25456834//25569111//22575960
chr11:63889589-63889590(-) m6A CDS       25683224//25456834//24981863//25569111//22575960
chr11:63889640-63889641(-) m6A CDS       25683224//25456834//24981863//25569111//22575960
chr11:63889717-63889718(-) m6A CDS       25683224//25456834//24981863//25569111
chr11:63889728-63889729(-) m6A CDS       25683224//25456834//24981863//25569111
chr11:63889742-63889743(-) m6A CDS       25683224//25456834//24981863//25569111
chr11:63921528-63921529(-) m6A CDS       25683224//25456834//24981863//25569111//22575960
chr11:63921574-63921575(-) m6A CDS       25683224//25456834//24981863//25569111//22575960
chr11:63921637-63921638(-) m6A CDS       25683224//25456834//24981863//25569111//22575960
chr11:63921936-63921937(-) m6A 5'UTR       25456834//24981863//25569111
chr11:63921965-63921966(-) m6A 5'UTR       25456834//24981863//25569111
chr11:63921997-63921998(-) m6A 5'UTR       25456834//24981863//25569111
chr11:63922119-63922120(-) m6A 5'UTR       25683224//24981863//25569111

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-m01-3-5p
Interactor2: Hs3st3b1

Evidence Support:


Prediction-Evidence cRep
Support Database RepTar

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