Basic Information:

  VIRBase ID:  

VHID00592343

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-3-5p:  MIMAT0005536          Rock2:  NM_009072     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-3-5p	Rock2
miRBase Accession/Entrez ID	MIMAT0005536	19878
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	B230113H15Rik//mKIAA0619//Rho-//Rho-kinase//RO//Roc//Rock//Rock-II//Rock2m//ROKalpha

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Rock2	chr12:16895126-16895127(+) m6A 5'UTR       25412662 chr12:16895234-16895235(+) m6A CDS       25412662//24981863//25569111 chr12:16895295-16895296(+) m6A CDS       25412662//24981863//25569111//22608085 chr12:16952534-16952535(+) m6A CDS       24981863//22608085 chr12:16953299-16953300(+) m6A CDS       24981863//22608085 chr12:16953346-16953347(+) m6A CDS       24981863//25569111//22608085 chr12:16954952-16954953(+) m6A CDS       24981863 chr12:16957254-16957255(+) m6A CDS       24981863 chr12:16957293-16957294(+) m6A CDS       24981863 chr12:16957485-16957486(+) m6A CDS       24981863 chr12:16958153-16958154(+) m6A CDS       24981863 chr12:16958239-16958240(+) m6A CDS       24981863 chr12:16958381-16958382(+) m6A CDS       24981863 chr12:16958768-16958769(+) m6A CDS       24981863//22608085 chr12:16958782-16958783(+) m6A CDS       24981863//22608085 chr12:16958835-16958836(+) m6A CDS       24981863 chr12:16958840-16958841(+) m6A CDS       24981863 chr12:16959433-16959434(+) m6A CDS       24981863 chr12:16959474-16959475(+) m6A CDS       25412662//24981863 chr12:16961677-16961678(+) m6A CDS       25412662//24981863 chr12:16961692-16961693(+) m6A CDS       25412662//24981863 chr12:16961699-16961700(+) m6A CDS       25412662//24981863 chr12:16965061-16965062(+) m6A CDS       24981863 chr12:16965100-16965101(+) m6A CDS       24981863 chr12:16965113-16965114(+) m6A CDS       24981863 chr12:16965500-16965501(+) m6A CDS       24981863 chr12:16965542-16965543(+) m6A CDS       24981863 chr12:16965586-16965587(+) m6A CDS       24981863 chr12:16965621-16965622(+) m6A CDS       25683224//24981863 chr12:16965643-16965644(+) m6A CDS       25683224//24981863 chr12:16966656-16966657(+) m6A CDS       25683224//24981863 chr12:16966664-16966665(+) m6A CDS       25683224//24981863 chr12:16968222-16968223(+) m6A CDS       25683224//24981863 chr12:16968236-16968237(+) m6A CDS       25683224//24981863 chr12:16968261-16968262(+) m6A CDS       25683224//24981863 chr12:16968266-16968267(+) m6A CDS       25683224//24981863 chr12:16968581-16968582(+) m6A CDS       24981863 chr12:16968657-16968658(+) m6A CDS       25412662 chr12:16968723-16968724(+) m6A CDS       25412662//24981863 chr12:16968729-16968730(+) m6A CDS       25412662//24981863 chr12:16968735-16968736(+) m6A CDS       25412662//24981863 chr12:16971057-16971058(+) m6A CDS       25412662//24981863 chr12:16971066-16971067(+) m6A CDS       25412662//24981863 chr12:16971115-16971116(+) m6A CDS       25412662//24981863 chr12:16971304-16971305(+) m6A CDS       25412662//24981863 chr12:16971313-16971314(+) m6A CDS       25412662//24981863 chr12:16972698-16972699(+) m6A CDS       25412662//24981863 chr12:16972748-16972749(+) m6A CDS       25412662//24981863 chr12:16972821-16972822(+) m6A CDS       24981863 chr12:16973012-16973013(+) m6A CDS       24981863 chr12:16973029-16973030(+) m6A CDS       24981863 chr12:16973038-16973039(+) m6A CDS       24981863 chr12:16973051-16973052(+) m6A CDS       24981863 chr12:16973092-16973093(+) m6A CDS       24981863 chr12:16976064-16976065(+) m6A CDS       22608085 chr12:16977576-16977577(+) m6A CDS       24981863//22608085 chr12:16977594-16977595(+) m6A CDS       24981863//22608085 chr12:16977633-16977634(+) m6A CDS       24981863//22608085 chr12:16977770-16977771(+) m6A CDS       22608085 chr12:16977946-16977947(+) m6A CDS       24981863 chr12:16978005-16978006(+) m6A CDS       24981863//25569111 chr12:16978031-16978032(+) m6A CDS       24981863//25569111 chr12:16978053-16978054(+) m6A CDS       24981863//25569111 chr12:16978092-16978093(+) m6A CDS       25683224//25456834//24981863//25569111 chr12:16984694-16984695(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr12:16984715-16984716(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr12:16984739-16984740(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr12:16984837-16984838(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr12:16984846-16984847(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr12:16984889-16984890(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr12:16984922-16984923(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr12:16985119-16985120(+) m6A 3'UTR       24981863//25569111//22608085 chr12:16985439-16985440(+) m6A 3'UTR       25569111//22608085 chr12:16987596-16987597(+) m6A 3'UTR       24981863//22608085 chr12:16987655-16987656(+) m6A 3'UTR       24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Rock2	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-3-5p
Interactor2: Rock2

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar