Basic Information:

  VIRBase ID:  

VHID00592190

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-3-5p:  MIMAT0005536          Sigmar1:  NM_001286551     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-3-5p	Sigmar1
miRBase Accession/Entrez ID	MIMAT0005536	18391
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	mSig//O//Oprs1//Si//Sig1R//sigma1R

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Sigmar1	chr4:41738554-41738555(-) m6A 3'UTR       22575960 chr4:41738589-41738590(-) Y 3'UTR//exon       26075521 chr4:41738590-41738591(-) Y 3'UTR//exon       26075521 chr4:41738641-41738642(-) m6A 3'UTR       22575960 chr4:41738704-41738705(-) m6A 3'UTR       - chr4:41739069-41739070(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr4:41739153-41739154(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr4:41739169-41739170(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr4:41739194-41739195(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr4:41739216-41739217(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr4:41739265-41739266(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr4:41739277-41739278(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr4:41739304-41739305(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr4:41739320-41739321(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr4:41739360-41739361(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085//22575960 chr4:41739441-41739442(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr4:41739525-41739526(-) m6A CDS//exon       25456834//25412662//24981863//25569111 chr4:41739530-41739531(-) m6A CDS//exon       25456834//25412662//24981863//25569111 chr4:41739574-41739575(-) m6A CDS//exon       25412662//24981863//25569111 chr4:41740493-41740494(-) m6A exon//intron       25412662//25569111 chr4:41741151-41741152(-) m6A CDS//exon//intron       25569111//22575960 chr4:41741310-41741311(-) m6A 5'UTR//exon//intron       24981863//25569111//22575960 chr4:41755715-41755716(-) m6A exon       25683224 chr4:41755721-41755722(-) m6A exon       25683224 chr4:41755930-41755931(-) m6A exon       24981863 chr4:41755949-41755950(-) m6A exon       24981863 chr4:41756102-41756103(-) m6A exon       25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-3-5p
Interactor2: Sigmar1

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar