Basic Information:

  VIRBase ID:  

VHID00592174

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-3-5p:  MIMAT0005536          Nrf1:  NM_001361694     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-3-5p	Nrf1
miRBase Accession/Entrez ID	MIMAT0005536	18181
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	C87038//D6Ertd415//D6Ertd415e

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Nrf1	chr6:30006219(+) A-I      intronic chr6:30006202(+) A-I      intronic chr6:30006223(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Nrf1	chr6:30056202(+) A-I intron -    22524474 chr6:30056219(+) A-I intron -    22524474 chr6:30056223(+) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Nrf1	chr6:30088939-30088940(+) m6A 5'UTR//exon//intron       25683224//22608085 chr6:30089947-30089948(+) m6A CDS//exon       25683224//22608085 chr6:30089952-30089953(+) m6A CDS//exon       25683224//22608085 chr6:30126291-30126292(+) m6A CDS//intron       25683224 chr6:30126313-30126314(+) m6A CDS//intron       25683224 chr6:30129221-30129222(+) m6A CDS//intron       25683224 chr6:30129252-30129253(+) m6A CDS//intron       25683224 chr6:30140230-30140231(+) m6A CDS//intron       25683224 chr6:30140394-30140395(+) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111 chr6:30140431-30140432(+) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111 chr6:30140478-30140479(+) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111 chr6:30140519-30140520(+) m6A 3'UTR//intron       25683224//25456834//24981863//25569111 chr6:30140556-30140557(+) m6A 3'UTR//intron       25683224//25456834//24981863//25569111 chr6:30140708-30140709(+) m6A 3'UTR//intron       25683224//25456834//24981863//25569111 chr6:30140714-30140715(+) m6A 3'UTR//intron       25683224//25456834//24981863//25569111 chr6:30140754-30140755(+) m6A 3'UTR//intron       25683224//25456834//24981863//25569111 chr6:30140777-30140778(+) m6A 3'UTR//intron       25683224//25456834//24981863//25569111 chr6:30140810-30140811(+) m6A 3'UTR//intron       25683224//25456834//24981863//25569111 chr6:30140836-30140837(+) m6A 3'UTR//intron       25683224//25456834//25569111 chr6:30145181-30145182(+) m6A 3'UTR//intron       25412662//24981863//25569111 chr6:30151545-30151546(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111 chr6:30151621-30151622(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111 chr6:30151670-30151671(+) m6A 3'UTR//CDS       25683224//24981863//25412662//25569111 chr6:30151915-30151916(+) m6A 3'UTR       24981863 chr6:30151993-30151994(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr6:30152051-30152052(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr6:30152086-30152087(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr6:30152095-30152096(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr6:30152101-30152102(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr6:30152139-30152140(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr6:30152193-30152194(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr6:30152249-30152250(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr6:30152286-30152287(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr6:30152324-30152325(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr6:30152364-30152365(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr6:30152477-30152478(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr6:30152535-30152536(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr6:30152687-30152688(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr6:30152717-30152718(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111 chr6:30152760-30152761(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22575960 chr6:30152775-30152776(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22575960 chr6:30152815-30152816(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22575960 chr6:30152826-30152827(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22575960 chr6:30152863-30152864(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr6:30153009-30153010(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr6:30153092-30153093(+) m6A 3'UTR       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Nrf1	Exosome Mast cells     17486113

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-3-5p
Interactor2: Nrf1

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar