Basic Information:

  VIRBase ID:  

VHID00591700

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-3-5p:  MIMAT0005536          Ctsl:  NM_009984     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-3-5p	Ctsl
miRBase Accession/Entrez ID	MIMAT0005536	13039
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	1190035F06Rik//CatL//Ctsl1//fs//ME//MEP//nkt

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Ctsl	chr13:64364016-64364017(-) m6A 3'UTR       24981863//25569111//26404942//22575960 chr13:64364032-64364033(-) m6A 3'UTR       24981863//25569111//26404942//22575960 chr13:64364041-64364042(-) m6A 3'UTR       24981863//25569111//26404942//22575960 chr13:64364070-64364071(-) m6A 3'UTR       24981863//25569111//26404942//22575960 chr13:64364078-64364079(-) m6A 3'UTR       24981863//25569111//26404942 chr13:64364133-64364134(-) m6A CDS       24981863//25569111//26404942 chr13:64364146-64364147(-) m6A CDS       24981863//25569111//26404942 chr13:64364152-64364153(-) m6A CDS       24981863//25569111//26404942 chr13:64365207-64365208(-) m6A CDS       24981863//25569111//26404942//22608085 chr13:64365244-64365245(-) m6A CDS       26404942//22608085 chr13:64366898-64366899(-) m6A CDS       25569111//22608085 chr13:64366985-64366986(-) m6A CDS       25569111//22608085 chr13:64366994-64366995(-) m6A CDS       25569111//22608085 chr13:64366999-64367000(-) m6A CDS       25569111//22608085 chr13:64367017-64367018(-) m6A CDS       25569111//22608085 chr13:64367025-64367026(-) m6A CDS       25569111//22608085 chr13:64367041-64367042(-) m6A CDS       25569111//22608085 chr13:64367863-64367864(-) m6A CDS       25569111//22608085 chr13:64367899-64367900(-) m6A CDS       25412662//25569111//22608085 chr13:64367931-64367932(-) m6A CDS       25412662//25569111//22608085 chr13:64368200-64368201(-) m6A CDS       25412662//24981863//25569111//26404942//22608085 chr13:64369039-64369040(-) m6A CDS       25412662//24981863//25569111//26404942//22608085 chr13:64369083-64369084(-) m6A CDS       25412662//24981863//25569111//22608085 chr13:64369113-64369114(-) m6A CDS       25412662//24981863//25569111//22608085 chr13:64369155-64369156(-) m6A 5'UTR       24981863//25569111//22575960 chr13:64370262-64370263(-) m6A 5'UTR       24981863//25569111//22575960 chr13:64370295-64370296(-) m6A 5'UTR       24981863//25569111//22575960

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Ctsl	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-3-5p
Interactor2: Ctsl

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar