Basic Information:

  VIRBase ID:  

VHID00591583

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-3-5p:  MIMAT0005536          Capn2:  NM_009794     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-3-5p	Capn2
miRBase Accession/Entrez ID	MIMAT0005536	12334
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	AI326419//Ca//CALP80//Cap//Capa-2//Capa2//m-c//m-calpain//m-calpin

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Capn2	chr1:182467310-182467311(-) m6A 3'UTR       24981863//25456834//25569111//22608085 chr1:182467359-182467360(-) m6A 3'UTR       24981863//25569111//22608085 chr1:182467384-182467385(-) m6A 3'UTR       24981863//25569111//22608085 chr1:182467406-182467407(-) m6A 3'UTR       24981863//25569111//22608085 chr1:182467415-182467416(-) m6A 3'UTR       24981863//25569111//26404942//22608085 chr1:182467499-182467500(-) m6A 3'UTR       24981863//25569111//22608085 chr1:182467529-182467530(-) m6A 3'UTR       24981863//25569111 chr1:182467632-182467633(-) m6A 3'UTR       24981863//25569111 chr1:182467711-182467712(-) m6A 3'UTR       24981863//25569111//26404942//22575960 chr1:182467757-182467758(-) m6A 3'UTR       24981863//25569111//26404942//22575960 chr1:182467778-182467779(-) m6A 3'UTR       24981863//25569111//26404942//22575960 chr1:182467871-182467872(-) m6A 3'UTR       24981863//25569111//26404942 chr1:182468028-182468029(-) m6A 3'UTR       25683224//24981863//25569111//26404942 chr1:182468068-182468069(-) m6A 3'UTR       24981863//25569111//26404942 chr1:182468124-182468125(-) m6A 3'UTR       24981863//25569111//26404942 chr1:182468134-182468135(-) m6A 3'UTR       24981863//25569111//26404942 chr1:182468141-182468142(-) m6A 3'UTR       24981863//25569111//26404942 chr1:182468156-182468157(-) m6A 3'UTR       24981863//25569111//26404942 chr1:182468177-182468178(-) m6A 3'UTR       24981863//25569111//26404942 chr1:182470209-182470210(-) m6A CDS       25569111 chr1:182470218-182470219(-) m6A CDS//exon       25569111 chr1:182472562-182472563(-) m6A CDS//exon       24981863//22608085 chr1:182472573-182472574(-) m6A CDS//exon       24981863//22608085 chr1:182472877-182472878(-) m6A exon//intron       25412662 chr1:182473891-182473892(-) m6A CDS//exon       25412662//22608085 chr1:182473910-182473911(-) m6A CDS//exon       25412662//22608085 chr1:182481623-182481624(-) m6A CDS       25412662//22608085 chr1:182481645-182481646(-) m6A CDS       25412662//22608085 chr1:182483907-182483908(-) m6A exon//intron       25412662//22608085 chr1:182483962-182483963(-) m6A exon//intron       25412662//22608085 chr1:182484010-182484011(-) m6A exon//intron       25412662 chr1:182484233-182484234(-) m6A CDS//exon       25412662//24981863 chr1:182484326-182484327(-) m1A CDS//exon       26863196 chr1:182490132-182490133(-) m6A exon//intron       24981863//22608085 chr1:182490253-182490254(-) m6A exon//intron       25456834//24981863//22608085 chr1:182490487-182490488(-) m6A exon//intron       24981863//22608085 chr1:182490670-182490671(-) m6A exon//intron       25456834//24981863//22608085 chr1:182490726-182490727(-) m6A exon//intron       25456834//24981863//22608085 chr1:182492256-182492257(-) m6A exon//intron       24981863//22608085 chr1:182492285-182492286(-) m6A exon//intron       24981863//22608085 chr1:182492776-182492777(-) m6A CDS//exon       25412662//24981863 chr1:182492866-182492867(-) m6A CDS//exon       25412662//24981863 chr1:182508815-182508816(-) m6A exon//intron       25412662 chr1:182508901-182508902(-) m6A exon//intron       25569111 chr1:182512226-182512227(-) m6A CDS//exon       25569111//22608085 chr1:182517146-182517147(-) m6A CDS//exon       25412662//24981863//25569111//22608085 chr1:182517262-182517263(-) m6A CDS//exon       25412662//24981863//25569111 chr1:182517322-182517323(-) m6A CDS//exon       25412662//24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-3-5p
Interactor2: Capn2

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar