Basic Information:

  VIRBase ID:  

VHID00591513

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-3-5p:  MIMAT0005536          Api5:  NM_001305258     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-3-5p	Api5
miRBase Accession/Entrez ID	MIMAT0005536	11800
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	AAC-//AAC-11//AI196452//API-5

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Api5	chr2:94411802-94411803(-) m6A 3'UTR       24981863//25569111 chr2:94411974-94411975(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr2:94412013-94412014(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr2:94412034-94412035(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr2:94412090-94412091(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:94412132-94412133(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:94412144-94412145(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:94412167-94412168(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:94412189-94412190(-) m6A 3'UTR       25456834//25412662//24981863//25569111//22608085 chr2:94412196-94412197(-) m6A 3'UTR       25456834//25412662//24981863//25569111//22608085 chr2:94412314-94412315(-) m6A 3'UTR       25412662//25569111 chr2:94412507-94412508(-) m6A 3'UTR       22608085 chr2:94413148-94413149(-) m6A 3'UTR       25569111//22608085 chr2:94413453-94413454(-) m6A 3'UTR       24981863//25569111 chr2:94413522-94413523(-) m6A 3'UTR       25683224//24981863//25569111 chr2:94413545-94413546(-) m6A 3'UTR       25683224//24981863//25569111 chr2:94413613-94413614(-) m6A 3'UTR       25683224//24981863//25569111//22608085 chr2:94413712-94413713(-) m6A 3'UTR       25683224//24981863//25569111 chr2:94413738-94413739(-) m6A 3'UTR       24981863//25569111 chr2:94418313-94418314(-) m6A CDS//exon       24981863//22608085 chr2:94418331-94418332(-) m6A CDS//exon       24981863//22608085 chr2:94418381-94418382(-) m6A CDS//exon       24981863//22608085 chr2:94418893-94418894(-) m6A CDS//exon       24981863//22608085 chr2:94425724-94425725(-) m6A CDS//exon       25412662//22608085 chr2:94426956-94426957(-) m6A CDS//exon       25412662//22608085 chr2:94438005-94438006(-) m6A 5'UTR//exon       25412662//24981863//25569111//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Api5	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-3-5p
Interactor2: Api5

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar