Basic Information:

  VIRBase ID:  

VHID00590731

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-2-5p:  MIMAT0005534          Slc15a4:  NM_133895     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-2-5p	Slc15a4
miRBase Accession/Entrez ID	MIMAT0005534	100561
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	AA987064//AW742963//C130069N12Rik//PHT//PHT1//PT//PTR4

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Slc15a4	chr5:127595669-127595670(-) m6A 3'UTR       24981863 chr5:127595719-127595720(-) m6A 3'UTR       25683224//24981863//25456834//22608085 chr5:127595793-127595794(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr5:127595843-127595844(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr5:127595894-127595895(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr5:127595899-127595900(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr5:127595918-127595919(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr5:127595961-127595962(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr5:127595974-127595975(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr5:127596043-127596044(-) m6A 3'UTR       25683224//24981863//25569111 chr5:127596059-127596060(-) m6A 3'UTR       25683224//24981863//25569111 chr5:127596167-127596168(-) m6A 3'UTR       24981863//25569111 chr5:127596488-127596489(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:127596505-127596506(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:127596539-127596540(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:127596589-127596590(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:127596628-127596629(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:127596655-127596656(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:127596768-127596769(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111 chr5:127600477-127600478(-) m6A 3'UTR//CDS//intron       25683224//25569111 chr5:127600522-127600523(-) m6A 3'UTR//CDS//intron       25683224//25569111 chr5:127616034-127616035(-) m6A exon//intron       25683224 chr5:127616125-127616126(-) m6A exon//intron       25683224 chr5:127616143-127616144(-) m6A exon//intron       25683224 chr5:127616223-127616224(-) m6A exon//intron       25683224 chr5:127616253-127616254(-) m6A exon//intron       25683224 chr5:127616986-127616987(-) m6A CDS//exon//intron       25412662 chr5:127617375-127617376(-) m6A 5'UTR//exon//intron       25412662//24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-2-5p
Interactor2: Slc15a4

Evidence Support:

Prediction-Evidence	Rep
Support Database	RepTar