Basic Information:

  VIRBase ID:  

VHID00590623

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-2-5p:  MIMAT0005534          Cers2:  NM_029789     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-2-5p	Cers2
miRBase Accession/Entrez ID	MIMAT0005534	76893
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	0610013I17Rik//AI225939//Cer//L//Lass2//Trh//TRH3

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Cers2	chr3:95315253-95315254(+) m6A 5'UTR//exon//intron       25456834//24981863//25569111//22575960 chr3:95317391-95317392(+) m6A exon//intron       25456834//24981863//25569111//22575960 chr3:95317399-95317400(+) m6A exon//intron       25456834//24981863//25569111//22575960 chr3:95318796-95318797(+) m6A 5'UTR//intron       22575960 chr3:95318817-95318818(+) m6A 5'UTR//intron       22575960 chr3:95320071-95320072(+) m6A CDS//exon       25456834//24981863//25569111//22575960 chr3:95320117-95320118(+) m6A CDS//exon       25456834//24981863//25569111//22575960 chr3:95320141-95320142(+) m6A CDS//exon       25456834//24981863//25569111//22575960 chr3:95320251-95320252(+) m6A exon//intron       24981863//25569111 chr3:95320687-95320688(+) m6A CDS//exon       25569111 chr3:95320722-95320723(+) m6A CDS//exon       25569111 chr3:95320735-95320736(+) m6A CDS//exon       25569111 chr3:95320951-95320952(+) m6A CDS//exon       25569111 chr3:95322681-95322682(+) m6A CDS       24981863//25569111//26404942 chr3:95322705-95322706(+) m6A CDS       24981863//25456834//25569111//26404942 chr3:95322789-95322790(+) m6A 3'UTR       24981863//25456834//25569111//26404942 chr3:95322834-95322835(+) m6A 3'UTR       24981863//25569111//26404942 chr3:95322935-95322936(+) m6A 3'UTR       24981863//25569111//26404942 chr3:95322940-95322941(+) m6A 3'UTR       24981863//25569111 chr3:95322947-95322948(+) m6A 3'UTR       24981863//25569111 chr3:95323444-95323445(+) m6A 3'UTR       26404942//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Cers2	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-2-5p
Interactor2: Cers2

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar