Basic Information:

  VIRBase ID:  

VHID00590554

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-2-5p:  MIMAT0005534          Syvn1:  NM_001164709     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-2-5p	Syvn1
miRBase Accession/Entrez ID	MIMAT0005534	74126
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	1200010C09Rik//AW211966//C85322//D530017H19Rik//Hrd//Hrd1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Syvn1	chr19:6046976-6046977(+) m6A 5'UTR       25412662 chr19:6047174-6047175(+) m6A 5'UTR//intron       25412662//24981863//25569111 chr19:6047254-6047255(+) m6A 5'UTR//intron       25412662 chr19:6048010-6048011(+) m6A CDS//exon       25569111 chr19:6049176-6049177(+) m6A CDS//exon//intron       24981863//25569111 chr19:6049646-6049647(+) m6A exon//intron       25569111 chr19:6049655-6049656(+) m6A exon//intron       25569111 chr19:6050545-6050546(+) m6A CDS//exon       25412662 chr19:6050552-6050553(+) m6A CDS//exon       25412662 chr19:6050635-6050636(+) m6A CDS//exon       25412662//24981863 chr19:6050714-6050715(+) m6A exon//intron       25412662//24981863 chr19:6050819-6050820(+) m6A exon//intron       25412662 chr19:6050896-6050897(+) m6A exon//intron       25412662 chr19:6051120-6051121(+) m6A exon//intron       25412662 chr19:6051128-6051129(+) m6A exon//intron       25412662 chr19:6052490-6052491(+) m6A exon//intron       25412662 chr19:6052568-6052569(+) Y CDS//exon       26075521 chr19:6052608-6052609(+) m6A CDS//exon       25683224//25412662//24981863//25569111 chr19:6052667-6052668(+) m6A 3'UTR//exon       25683224//25412662//24981863//25569111//22575960 chr19:6052702-6052703(+) m6A 3'UTR//exon       25683224//25412662//24981863//25569111//22575960 chr19:6052772-6052773(+) m6A 3'UTR//exon       25683224//25412662//24981863//25569111//22608085//22575960 chr19:6052997-6052998(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr19:6053015-6053016(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr19:6053046-6053047(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr19:6053063-6053064(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr19:6053073-6053074(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr19:6053097-6053098(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr19:6053137-6053138(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr19:6053259-6053260(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111 chr19:6053349-6053350(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22575960 chr19:6053365-6053366(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22575960 chr19:6053412-6053413(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22575960 chr19:6053510-6053511(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22575960 chr19:6053525-6053526(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22575960

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-2-5p
Interactor2: Syvn1

Evidence Support:

Prediction-Evidence	Rep
Support Database	RepTar