Basic Information:

  VIRBase ID:  

VHID00590344

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-2-5p:  MIMAT0005534          Dnajb11:  NM_026400     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-2-5p	Dnajb11
miRBase Accession/Entrez ID	MIMAT0005534	67838
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	1810031F23Rik//ABBP//ABBP-2//AL024055//Dj9//ERdj//ERdj3//ERj3p

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Dnajb11	chr16:22857950-22857951(+) m6A 5'UTR//exon       25412662//25569111 chr16:22858028-22858029(+) m6A 5'UTR//exon       25683224//25412662//25569111//22608085 chr16:22858054-22858055(+) m6A CDS//exon       25683224//25412662//22608085 chr16:22858095-22858096(+) m6A CDS//intron       25683224//25412662//24981863//22608085 chr16:22862591-22862592(+) m6A CDS//intron       25683224//22608085 chr16:22862613-22862614(+) m6A CDS//intron       25683224//22608085 chr16:22862642-22862643(+) m6A CDS//intron       25683224//25569111//22608085 chr16:22865479-22865480(+) m6A CDS//intron       25569111//22608085 chr16:22865538-22865539(+) m6A CDS//intron       25569111//22608085 chr16:22866930-22866931(+) m6A CDS//intron       25569111//22608085 chr16:22868720-22868721(+) m6A CDS//intron       25683224//22608085 chr16:22868782-22868783(+) m6A CDS//intron       25683224//22608085 chr16:22868796-22868797(+) m6A CDS//intron       25683224//22608085 chr16:22869139-22869140(+) m6A CDS//intron       25683224//22608085 chr16:22869437-22869438(+) m6A CDS//exon//intron       25683224//22608085 chr16:22869445-22869446(+) m6A CDS//exon//intron       25683224//22608085 chr16:22870656-22870657(+) m6A CDS//exon//intron       25683224//22608085 chr16:22870955-22870956(+) m6A CDS//exon//intron       25683224//22608085 chr16:22871060-22871061(+) m6A CDS//exon//intron       25683224//24981863//22608085 chr16:22871073-22871074(+) m6A CDS//exon//intron       25683224//24981863//22608085 chr16:22871689-22871690(+) m6A CDS//exon//intron       25683224//24981863//25456834//26404942//22575960 chr16:22871746-22871747(+) m6A 3'UTR//exon       25683224//24981863//25456834//25569111//26404942//22575960 chr16:22871751-22871752(+) m6A 3'UTR//exon       25683224//24981863//25456834//25569111//22575960 chr16:22871874-22871875(+) m6A 3'UTR//exon//intron       24981863 chr16:22871908-22871909(+) m6A 3'UTR//exon//intron       24981863 chr16:22872222-22872223(+) m6A 3'UTR//exon//intron       25683224//24981863//25569111//22608085 chr16:22872255-22872256(+) m6A 3'UTR//exon//intron       25683224//24981863//25456834//25569111//22608085 chr16:22872264-22872265(+) m6A 3'UTR//exon//intron       25683224//24981863//25456834//25569111//22608085 chr16:22872271-22872272(+) m6A 3'UTR//exon//intron       25683224//24981863//25456834//25569111//22608085 chr16:22872302-22872303(+) m6A 3'UTR//exon//intron       25683224//24981863//25456834//25569111//22608085 chr16:22872322-22872323(+) m6A 3'UTR//intron       25683224//24981863//25456834//25569111//22608085 chr16:22879360-22879361(+) m6A 3'UTR       22575960 chr16:22879365-22879366(+) m6A 3'UTR       22575960 chr16:22879399-22879400(+) m6A 3'UTR       22575960 chr16:22879425-22879426(+) m6A 3'UTR       22575960 chr16:22879430-22879431(+) m6A 3'UTR       22575960 chr16:22879445-22879446(+) m6A 3'UTR       22575960

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Dnajb11	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-2-5p
Interactor2: Dnajb11

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar