Basic Information:

  VIRBase ID:  

VHID00590292

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-2-5p:  MIMAT0005534          Pi4k2b:  NM_028744     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-2-5p	Pi4k2b
miRBase Accession/Entrez ID	MIMAT0005534	67073
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	2610042N09Rik//4933409G22Rik

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Pi4k2b	chr5:52741611-52741612(+) m6A 5'UTR       25412662//25569111 chr5:52741713-52741714(+) m6A 5'UTR       25412662//24981863//25569111 chr5:52741949-52741950(+) m6A CDS       25412662//24981863 chr5:52743498-52743499(+) m6A CDS//intron       24981863 chr5:52743535-52743536(+) m6A CDS//intron       24981863 chr5:52750627-52750628(+) m6A 3'UTR//CDS       - chr5:52753243-52753244(+) m6A CDS       24981863 chr5:52754616-52754617(+) m6A exon//intron       24981863 chr5:52754636-52754637(+) m6A CDS//exon       24981863 chr5:52767734-52767735(+) m6A CDS       - chr5:52767770-52767771(+) m6A 3'UTR       - chr5:52768100-52768101(+) m6A 3'UTR       24981863//25569111 chr5:52768120-52768121(+) m6A 3'UTR       24981863//25569111 chr5:52768155-52768156(+) m6A 3'UTR       24981863//25569111 chr5:52768178-52768179(+) m6A 3'UTR       24981863//25569111 chr5:52768191-52768192(+) m6A 3'UTR       24981863//25569111 chr5:52768205-52768206(+) m6A 3'UTR       24981863//25569111 chr5:52768223-52768224(+) m6A 3'UTR       24981863//25569111 chr5:52768274-52768275(+) m6A 3'UTR       25569111 chr5:52768311-52768312(+) m6A 3'UTR       25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Pi4k2b	Cytoplasm Neuroblastoma cell line (N2A)     22406755 Cytoplasm Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-2-5p
Interactor2: Pi4k2b

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar