Basic Information:

  VIRBase ID:  

VHID00590132

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-2-5p:  MIMAT0005534          Plxnc1:  NM_018797     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-2-5p	Plxnc1
miRBase Accession/Entrez ID	MIMAT0005534	54712
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	2510048K12Rik//AW742158//CD232//v//Vespr

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Plxnc1	chr10:94791478-94791479(-) m6A 3'UTR       25683224//22608085 chr10:94791513-94791514(-) m6A 3'UTR       25683224//22608085 chr10:94792613-94792614(-) m6A 3'UTR       25683224//22608085 chr10:94792620-94792621(-) m6A 3'UTR       25683224//22608085 chr10:94792750-94792751(-) m6A 3'UTR       25683224//22608085 chr10:94793145-94793146(-) m6A 3'UTR       25683224//24981863 chr10:94798120-94798121(-) m6A CDS       25683224//22608085 chr10:94799321-94799322(-) m6A CDS       25683224//22608085 chr10:94799333-94799334(-) m6A CDS       25683224//22608085 chr10:94810683-94810684(-) m6A CDS       25683224//22608085 chr10:94810731-94810732(-) m6A CDS       25683224//22608085 chr10:94810739-94810740(-) m6A CDS       25683224//22608085 chr10:94810753-94810754(-) m6A CDS       25683224//22608085 chr10:94813147-94813148(-) m6A CDS       25683224//22608085 chr10:94827207-94827208(-) m6A CDS       25683224//22608085 chr10:94827261-94827262(-) m6A CDS       25683224//22608085 chr10:94827273-94827274(-) m6A CDS       25683224//22608085 chr10:94827313-94827314(-) m6A CDS       25683224//22608085 chr10:94831376-94831377(-) m6A CDS       25683224//22608085 chr10:94831457-94831458(-) m6A CDS       25683224//22608085 chr10:94831498-94831499(-) m6A CDS       25683224//22608085 chr10:94831503-94831504(-) m6A CDS       25683224//22608085 chr10:94833290-94833291(-) m6A CDS       25683224//22608085 chr10:94833305-94833306(-) m6A CDS       25683224//22608085 chr10:94837554-94837555(-) m6A CDS//exon       25683224//22608085 chr10:94837939-94837940(-) m6A CDS//exon       25683224//22608085 chr10:94841534-94841535(-) m6A CDS//exon       25683224//24981863//22608085 chr10:94841546-94841547(-) m6A CDS//exon       25683224//24981863//22608085 chr10:94841553-94841554(-) m6A CDS//exon       25683224//24981863//22608085 chr10:94843753-94843754(-) m6A CDS//exon       25683224//24981863//22608085 chr10:94843804-94843805(-) m6A CDS//exon       25683224//24981863 chr10:94844245-94844246(-) m6A CDS       25683224//22608085 chr10:94844272-94844273(-) m6A CDS       25683224//22608085 chr10:94844284-94844285(-) m6A CDS       25683224//22608085 chr10:94847521-94847522(-) m6A CDS       25683224//22608085 chr10:94847602-94847603(-) m6A CDS       25683224//22608085 chr10:94849900-94849901(-) m6A CDS       25683224//22608085 chr10:94852651-94852652(-) m6A CDS       25683224//24981863 chr10:94854546-94854547(-) m6A 3'UTR//intron       24981863 chr10:94854684-94854685(-) m6A 3'UTR//intron       24981863 chr10:94854691-94854692(-) m6A 3'UTR//intron       24981863 chr10:94864733-94864734(-) m6A 3'UTR//CDS       25683224//24981863 chr10:94864738-94864739(-) m6A 3'UTR//CDS       25683224//24981863 chr10:94864774-94864775(-) m6A 3'UTR//CDS       25683224//24981863 chr10:94866955-94866956(-) m6A CDS       25683224//22608085 chr10:94871054-94871055(-) m6A CDS//exon       25683224//22608085 chr10:94871083-94871084(-) m6A CDS//exon       25683224//22608085 chr10:94889417-94889418(-) Y intron       26075521 chr10:94906497-94906498(-) m6A CDS//exon       25683224//22608085 chr10:94906542-94906543(-) m6A CDS//exon       25683224//22608085 chr10:94910566-94910567(-) m6A CDS//exon       25683224//22608085 chr10:94910641-94910642(-) m6A CDS//exon       25683224//22608085 chr10:94922652-94922653(-) m6A CDS//exon       25683224//22608085 chr10:94922670-94922671(-) m6A CDS       25683224//22608085 chr10:94922675-94922676(-) m6A CDS       25683224//22608085 chr10:94943541-94943542(-) m6A CDS       25683224//24981863 chr10:94943667-94943668(-) m6A CDS       25683224//24981863 chr10:94943906-94943907(-) m6A CDS       25683224//24981863//25569111 chr10:94943952-94943953(-) m6A CDS       25683224//24981863//25569111 chr10:94944003-94944004(-) m6A CDS       25683224//24981863//25569111 chr10:94944010-94944011(-) m6A CDS       25683224//24981863//25569111 chr10:94944150-94944151(-) m6A CDS       25683224//24981863//25569111 chr10:94944196-94944197(-) m6A CDS       25683224//24981863//25569111 chr10:94944333-94944334(-) m6A CDS       25683224//25456834//24981863//25569111 chr10:94944357-94944358(-) m6A CDS       25683224//25456834//24981863//25569111 chr10:94944372-94944373(-) m6A CDS       25683224//25456834//24981863//25569111 chr10:94944381-94944382(-) m6A CDS       25683224//25456834//24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-2-5p
Interactor2: Plxnc1

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar