Basic Information:

  VIRBase ID:  

VHID00589968

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-2-5p:  MIMAT0005534          Zmat3:  NM_009517     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-2-5p	Zmat3
miRBase Accession/Entrez ID	MIMAT0005534	22401
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	Wig//Wig1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Zmat3	chr3:32335017-32335018(-) m6A 3'UTR       25683224 chr3:32335149-32335150(-) m6A 3'UTR       22608085 chr3:32335209-32335210(-) m6A 3'UTR       22608085 chr3:32336312-32336313(-) m6A 3'UTR       25412662//22608085 chr3:32336996-32336997(-) m6A 3'UTR       25683224//24981863 chr3:32337048-32337049(-) m6A 3'UTR       25683224//24981863 chr3:32337144-32337145(-) m6A 3'UTR       25683224 chr3:32337674-32337675(-) m6A 3'UTR       25683224//22608085 chr3:32337718-32337719(-) m6A 3'UTR       25683224//22608085 chr3:32337758-32337759(-) m6A 3'UTR       25683224//22608085 chr3:32337799-32337800(-) m6A 3'UTR       25683224//22608085 chr3:32337835-32337836(-) m6A 3'UTR       25683224//22608085 chr3:32338952-32338953(-) Y 3'UTR//exon       26075521 chr3:32339169-32339170(-) m6A 3'UTR       25683224//22608085 chr3:32339186-32339187(-) m6A 3'UTR       25683224//22608085 chr3:32339590-32339591(-) m6A 3'UTR       25683224 chr3:32339712-32339713(-) m6A 3'UTR       25683224 chr3:32340223-32340224(-) m6A 3'UTR       25456834 chr3:32340299-32340300(-) m6A 3'UTR       24981863//25456834//22608085 chr3:32340308-32340309(-) m6A 3'UTR       24981863//25456834 chr3:32340762-32340763(-) m6A 3'UTR       25683224//24981863//25569111 chr3:32340863-32340864(-) m6A 3'UTR       25683224//24981863//25569111 chr3:32340889-32340890(-) m6A 3'UTR       25683224//24981863//25569111 chr3:32341060-32341061(-) m6A 3'UTR       25456834//24981863//25569111 chr3:32341092-32341093(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr3:32341100-32341101(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr3:32341281-32341282(-) m6A 3'UTR       25683224//25456834//25569111 chr3:32341502-32341503(-) m6A CDS       25683224//25412662//24981863//25569111 chr3:32343405-32343406(-) m6A CDS       25683224 chr3:32343431-32343432(-) m6A CDS       25683224//25412662 chr3:32343586-32343587(-) m6A CDS       25683224//25412662//22608085 chr3:32343599-32343600(-) m6A CDS       25683224//25412662//22608085 chr3:32365214-32365215(-) m6A 5'UTR//exon//intron       24981863//25569111 chr3:32365354-32365355(-) m6A 5'UTR//exon//intron       25683224//25412662//24981863//25569111 chr3:32365924-32365925(-) m6A exon       25683224//25456834//25412662//24981863//25569111//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Zmat3	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-2-5p
Interactor2: Zmat3

Evidence Support:

Prediction-Evidence	Rep
Support Database	RepTar