Basic Information:

  VIRBase ID:  

VHID00589892

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-2-5p:  MIMAT0005534          Sox9:  NM_011448     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-2-5p	Sox9
miRBase Accession/Entrez ID	MIMAT0005534	20682
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	2010306G03Rik//AV220920//mKIAA4243//mSox9

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Sox9	chr11:112782246-112782247(+) m6A 5'UTR       25683224//25412662//24981863//25569111 chr11:112782257-112782258(+) m6A 5'UTR       25683224//25412662//24981863//25569111 chr11:112782298-112782299(+) m6A 5'UTR       25683224//25412662//24981863//25569111 chr11:112782411-112782412(+) m6A 5'UTR       25683224//25412662//25569111 chr11:112782597-112782598(+) m6A CDS       25683224//25412662//25569111 chr11:112782669-112782670(+) m6A CDS       25683224//25412662//25569111 chr11:112782708-112782709(+) m6A CDS       25683224//25412662//24981863//25569111 chr11:112782717-112782718(+) m6A CDS       25683224//25412662//24981863//25569111 chr11:112782735-112782736(+) m6A CDS       25683224//25412662//24981863//25569111 chr11:112782767-112782768(+) m1A CDS       26863196 chr11:112782885-112782886(+) m6A CDS       25683224//25412662//24981863//25569111 chr11:112782957-112782958(+) m6A CDS       25683224//25412662//24981863//25569111 chr11:112782995-112782996(+) m6A CDS       25683224//25412662//24981863//25569111 chr11:112783832-112783833(+) m6A CDS       25683224//25412662//24981863//25569111 chr11:112783879-112783880(+) m6A CDS       25683224//25412662//24981863//25569111 chr11:112783931-112783932(+) m6A CDS       25683224//25412662//24981863//25569111 chr11:112783958-112783959(+) m6A CDS       25683224//25412662//24981863//25569111 chr11:112784712-112784713(+) m6A CDS       25683224//25412662//24981863//25569111 chr11:112784777-112784778(+) m6A CDS       25683224//25412662//24981863//25569111 chr11:112784806-112784807(+) m6A CDS       25683224//25412662//24981863//25569111 chr11:112784816-112784817(+) m6A CDS       25683224//25412662//24981863//25569111 chr11:112784847-112784848(+) m6A CDS       25683224//25412662//24981863//25569111 chr11:112785319-112785320(+) m6A CDS       25683224//24981863//25569111 chr11:112785388-112785389(+) m6A CDS       25683224//24981863//25569111 chr11:112785453-112785454(+) m6A CDS       25683224//24981863//25569111 chr11:112785476-112785477(+) m6A CDS       25683224//24981863//25569111 chr11:112785503-112785504(+) m6A CDS       25683224//24981863//25569111 chr11:112785606-112785607(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr11:112785626-112785627(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr11:112785663-112785664(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr11:112785706-112785707(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr11:112785714-112785715(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr11:112785773-112785774(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr11:112785794-112785795(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr11:112785876-112785877(+) m6A 3'UTR       25683224//24981863//25569111//22608085//22575960 chr11:112786125-112786126(+) m6A 3'UTR       25683224//22608085 chr11:112786133-112786134(+) m6A 3'UTR       25683224//22608085 chr11:112786139-112786140(+) m6A 3'UTR       25683224//22608085 chr11:112786145-112786146(+) m6A 3'UTR       25683224//22608085 chr11:112786154-112786155(+) m6A 3'UTR       25683224//22608085 chr11:112786394-112786395(+) m6A 3'UTR       25683224//24981863 chr11:112786462-112786463(+) m6A 3'UTR       25683224//24981863 chr11:112786696-112786697(+) m6A 3'UTR       25683224//25569111 chr11:112786740-112786741(+) m6A 3'UTR       25683224//25569111 chr11:112787122-112787123(+) m6A 3'UTR       25683224//25569111 chr11:112787129-112787130(+) m6A 3'UTR       25683224//25569111 chr11:112787151-112787152(+) m6A 3'UTR       25683224//24981863//25569111 chr11:112787214-112787215(+) m6A 3'UTR       25683224//24981863//25569111 chr11:112787232-112787233(+) m6A 3'UTR       25683224//24981863//25569111 chr11:112787268-112787269(+) m6A 3'UTR       25683224//24981863//25569111 chr11:112787332-112787333(+) m6A 3'UTR       25683224//24981863//25569111 chr11:112787339-112787340(+) m6A 3'UTR       25683224//24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-2-5p
Interactor2: Sox9

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar