Basic Information:

  VIRBase ID:  

VHID00589862

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-2-5p:  MIMAT0005534          Shc1:  NM_011368     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-2-5p	Shc1
miRBase Accession/Entrez ID	MIMAT0005534	20416
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	p6//p66//p66s//p66shc//Sh//Shc//ShcA

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Shc1	chr3:89418451-89418452(+) m6A 5'UTR       24981863//25569111 chr3:89418540-89418541(+) m6A 5'UTR       25456834//24981863//25569111 chr3:89418646-89418647(+) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111 chr3:89418664-89418665(+) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111 chr3:89418693-89418694(+) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111 chr3:89418703-89418704(+) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111 chr3:89420673-89420674(+) m6A exon//intron       25683224//25412662//24981863//25569111 chr3:89421667-89421668(+) m6A 5'UTR//exon//intron       25683224//25412662//24981863//25569111 chr3:89421753-89421754(+) m6A 5'UTR//exon//intron       25683224//25412662//24981863//25569111 chr3:89421978-89421979(+) m6A CDS//exon//intron       25683224//24981863//25569111 chr3:89422151-89422152(+) m6A CDS//exon//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr3:89422178-89422179(+) m6A 5'UTR//CDS//exon//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr3:89422184-89422185(+) m6A 5'UTR//CDS//exon//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr3:89422213-89422214(+) m6A 5'UTR//CDS//exon//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr3:89422252-89422253(+) m6A 5'UTR//CDS//exon//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr3:89422257-89422258(+) m6A 5'UTR//CDS//exon//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr3:89422320-89422321(+) m6A CDS//exon//intron       25683224//25456834//24981863//25412662//25569111//22608085 chr3:89422411-89422412(+) m6A exon//intron       25569111 chr3:89422982-89422983(+) m6A CDS//exon       25683224//25569111 chr3:89426986-89426987(+) m6A CDS//exon       25683224 chr3:89427055-89427056(+) m6A CDS//exon       25683224//25412662 chr3:89427432-89427433(+) m6A CDS       25683224//25412662//24981863//25569111 chr3:89428322-89428323(+) m6A CDS       25683224//25412662//24981863//25569111 chr3:89428374-89428375(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr3:89428408-89428409(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr3:89428509-89428510(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr3:89428542-89428543(+) m6A 3'UTR       24981863//25569111 chr3:89428558-89428559(+) m6A 3'UTR       24981863//25569111 chr3:89428639-89428640(+) m6A 3'UTR       24981863 chr3:89429898-89429899(+) m6A 3'UTR       25683224 chr3:89429933-89429934(+) m6A 3'UTR       25683224

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-2-5p
Interactor2: Shc1

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar