Basic Information:

  VIRBase ID:  

VHID00589799

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-2-5p:  MIMAT0005534          Ctsa:  NM_008906     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-2-5p	Ctsa
miRBase Accession/Entrez ID	MIMAT0005534	19025
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	AU019505//P//Pp//PPCA//Ppgb

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Ctsa	chr2:164832986-164832987(+) m6A 5'UTR//exon       25683224//25412662//24981863//25569111//22608085 chr2:164833029-164833030(+) m6A 5'UTR//exon       25683224//25412662//24981863//25569111//22608085 chr2:164833039-164833040(+) m6A 5'UTR//exon       25683224//25412662//24981863//25569111//22608085 chr2:164833105-164833106(+) m6A 5'UTR//exon       25683224//25412662//24981863//25569111 chr2:164833145-164833146(+) m6A 5'UTR//exon       25412662//24981863//25569111 chr2:164833164-164833165(+) m6A 5'UTR//exon       25412662//24981863//25569111 chr2:164833633-164833634(+) m6A exon//intron       25412662//24981863//25569111 chr2:164833744-164833745(+) m6A 5'UTR//exon//intron       25412662//24981863//25569111 chr2:164833755-164833756(+) m6A 5'UTR//exon//intron       25412662//24981863//25569111 chr2:164833866-164833867(+) m6A CDS//exon//intron       25683224//25412662//24981863//25569111//22575960 chr2:164833955-164833956(+) m6A CDS//exon//intron       25683224//25412662//24981863//25569111 chr2:164833988-164833989(+) m6A CDS//exon//intron       25683224//25412662//24981863//25569111 chr2:164833996-164833997(+) m6A exon//intron       25683224//25412662//24981863//25569111 chr2:164834038-164834039(+) m6A CDS//exon//intron       25683224//25412662//24981863//25569111 chr2:164834105-164834106(+) m6A CDS//exon//intron       25683224//25412662//24981863//25569111 chr2:164834186-164834187(+) m6A CDS//exon//intron       24981863//25569111//22608085 chr2:164834282-164834283(+) m6A exon//intron       24981863//25569111//22608085 chr2:164834288-164834289(+) m6A exon//intron       24981863//25569111//22608085 chr2:164834348-164834349(+) m6A CDS//exon       24981863//25569111//22608085 chr2:164839347-164839348(+) m6A 3'UTR       24981863//25569111//22608085 chr2:164839356-164839357(+) m6A 3'UTR       24981863//25569111//22608085 chr2:164839404-164839405(+) m6A 3'UTR       24981863//25569111 chr2:164839414-164839415(+) m6A 3'UTR       24981863//25569111 chr2:164839475-164839476(+) m6A 3'UTR       24981863//25456834//25569111 chr2:164839490-164839491(+) m6A 3'UTR       24981863//25456834//25569111 chr2:164839510-164839511(+) m6A 3'UTR       24981863//25456834//25569111 chr2:164839733-164839734(+) m6A 3'UTR       25412662//22608085 chr2:164839840-164839841(+) m6A 3'UTR       25412662//22608085 chr2:164839872-164839873(+) m6A 3'UTR       25412662 chr2:164839883-164839884(+) m6A 3'UTR       25412662 chr2:164839894-164839895(+) m6A 3'UTR       25412662 chr2:164840419-164840420(+) m6A 3'UTR       25412662 chr2:164840467-164840468(+) m6A 3'UTR       25412662 chr2:164840502-164840503(+) m6A 3'UTR       25412662 chr2:164840514-164840515(+) m6A 3'UTR       25412662

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-2-5p
Interactor2: Ctsa

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar