Basic Information:

  VIRBase ID:  

VHID00589447

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-2-5p:  MIMAT0005534          Tpp1:  NM_009906     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-2-5p	Tpp1
miRBase Accession/Entrez ID	MIMAT0005534	12751
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	Cl//Cln2//LPIC//TPP-1//TPP-I

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Tpp1	chr7:105746436-105746437(-) m6A 3'UTR//exon       24981863//25456834//25569111//22608085//22575960 chr7:105746450-105746451(-) m6A 3'UTR//exon       24981863//25456834//25569111//22608085//22575960 chr7:105746482-105746483(-) m6A 3'UTR//exon       24981863//25456834//25569111//22608085//22575960 chr7:105746487-105746488(-) m6A 3'UTR//exon       24981863//25456834//25569111//22608085//22575960 chr7:105746538-105746539(-) m6A 3'UTR//exon       24981863//25569111//22608085//22575960 chr7:105746602-105746603(-) m6A 3'UTR//exon       24981863//25569111//22575960 chr7:105746648-105746649(-) m6A CDS//exon       24981863//25569111//22575960 chr7:105746675-105746676(-) m6A CDS//exon       24981863 chr7:105749047-105749048(-) Y CDS//exon       26075521 chr7:105751638-105751639(-) m6A CDS//exon//intron       24981863//25569111 chr7:105751648-105751649(-) m6A CDS//exon//intron       25683224//24981863//25412662//25569111 chr7:105751656-105751657(-) m6A CDS//exon//intron       25683224//24981863//25412662//25569111 chr7:105751993-105751994(-) m6A CDS//exon       25683224//24981863//25456834//25412662//25569111//22575960 chr7:105752073-105752074(-) m6A exon//intron       25683224//25456834//24981863//25412662//25569111//22608085//22575960 chr7:105752162-105752163(-) m6A exon//intron       25456834//24981863//25569111//22608085 chr7:105752181-105752182(-) m6A CDS//exon       24981863//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Tpp1	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-2-5p
Interactor2: Tpp1

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar