Basic Information:

  VIRBase ID:  

VHID00589328

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-1:  MIMAT0005533          Rubcn:  NM_172615     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-1	Rubcn
miRBase Accession/Entrez ID	MIMAT0005533	100502698
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	1700021K19Rik//5330403K09//mKIAA0226//Rubicon

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Rubcn	chr16:32839728(-) A-I      intronic chr16:32840239(-) A-I      intronic chr16:32840307(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Rubcn	chr16:32821928-32821929(-) m6A 3'UTR//exon       25683224//22608085 chr16:32823555-32823556(-) m6A 3'UTR//exon       24981863//22608085 chr16:32823561-32823562(-) m6A 3'UTR//exon       24981863//25569111//22608085 chr16:32823710-32823711(-) m6A 3'UTR//exon       24981863//22608085 chr16:32823745-32823746(-) m6A 3'UTR//exon       24981863//22608085 chr16:32823753-32823754(-) m6A 3'UTR//exon       24981863//22608085 chr16:32823917-32823918(-) m6A 3'UTR//exon       24981863//25569111 chr16:32823975-32823976(-) m6A CDS//exon       24981863//25569111 chr16:32824122-32824123(-) m6A CDS//exon       25569111 chr16:32825623-32825624(-) m6A CDS//exon       25412662//22608085 chr16:32825672-32825673(-) m6A CDS//exon       25412662//22608085 chr16:32826153-32826154(-) m6A CDS//exon       25412662//22608085 chr16:32836421-32836422(-) m6A CDS//exon       25412662 chr16:32836444-32836445(-) m6A CDS//exon       25412662//24981863//22608085 chr16:32836491-32836492(-) m6A CDS//exon       25412662//24981863//22608085 chr16:32838247-32838248(-) m6A CDS//exon       25412662//22608085 chr16:32838265-32838266(-) m6A CDS//exon       25412662//22608085 chr16:32843026-32843027(-) m6A CDS       25412662//24981863 chr16:32843057-32843058(-) m6A CDS       25412662//24981863//25569111 chr16:32843078-32843079(-) m6A CDS       25412662//24981863//25569111 chr16:32843146-32843147(-) m6A CDS       25412662//24981863//25569111 chr16:32843252-32843253(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr16:32843419-32843420(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr16:32843444-32843445(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22575960 chr16:32843450-32843451(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22575960 chr16:32843476-32843477(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22575960 chr16:32847320-32847321(-) m6A CDS       25412662//22608085 chr16:32847858-32847859(-) m6A CDS       25412662//22608085 chr16:32861461-32861462(-) m6A exon//intron       25683224//22608085 chr16:32861478-32861479(-) m6A exon//intron       25683224//22608085 chr16:32877475-32877476(-) m6A 5'UTR       25412662//22608085 chr16:32877572-32877573(-) m6A 5'UTR       25412662//22608085

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-1
Interactor2: Rubcn

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar