Basic Information:

  VIRBase ID:  

VHID00589084

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-1:  MIMAT0005533          Vwc2l:  NM_177164     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-1	Vwc2l
miRBase Accession/Entrez ID	MIMAT0005533	320460
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	A830006F12Rik//B//Brl//bror

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Vwc2l	chr1:70726042-70726043(+) m6A 5'UTR//exon       24981863//22608085 chr1:70726057-70726058(+) m6A 5'UTR//exon//intron       24981863//22608085 chr1:70726168-70726169(+) m6A 5'UTR//exon//intron       24981863 chr1:70726200-70726201(+) m6A 5'UTR//exon//intron       24981863 chr1:70726260-70726261(+) m6A 5'UTR//exon       24981863 chr1:70726354-70726355(+) m6A 5'UTR//exon       24981863 chr1:70728752-70728753(+) m6A 5'UTR//exon       24981863 chr1:70728860-70728861(+) m6A CDS//exon       24981863//22608085 chr1:70729023-70729024(+) m6A CDS//exon       24981863//22608085 chr1:70729080-70729081(+) m6A CDS//exon       24981863//22608085 chr1:70729118-70729119(+) m6A CDS//exon       24981863//22608085 chr1:70882086-70882087(+) m6A CDS       24981863//22608085 chr1:70882156-70882157(+) m6A 3'UTR//CDS       24981863//22608085 chr1:70882166-70882167(+) m6A 3'UTR//CDS       24981863//22608085 chr1:70882206-70882207(+) m6A 3'UTR//CDS       24981863//22608085 chr1:70882301-70882302(+) m6A 3'UTR       24981863//22608085 chr1:70882338-70882339(+) m6A 3'UTR       24981863//22608085 chr1:70882471-70882472(+) m6A 3'UTR       24981863//22608085 chr1:70882489-70882490(+) m6A 3'UTR       24981863//22608085 chr1:70882505-70882506(+) m6A 3'UTR       24981863//22608085 chr1:70882515-70882516(+) m6A 3'UTR       24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Vwc2l	Exosome Mast cells     17486113

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-1
Interactor2: Vwc2l

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar