Detail Information

Basic Information:


  VIRBase ID:  

VHID00588989

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-1:           Rnft2:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-m01-1 Rnft2
miRBase
Accession/Entrez ID		 MIMAT0005533 269695
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - AW049082//B830028P19Rik//Tmem118

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR Rnft2
chr5:118650424(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED Rnft2
chr5:118200415(-) A-I intron -    22524474

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Rnft2
chr5:118190757-118190758(-) m6A 3'UTR       25683224//25456834//25412662//24981863//22608085
chr5:118190772-118190773(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr5:118190795-118190796(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr5:118190858-118190859(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr5:118190916-118190917(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085
chr5:118190947-118190948(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085
chr5:118190961-118190962(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085
chr5:118190979-118190980(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085
chr5:118191015-118191016(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr5:118191022-118191023(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr5:118191097-118191098(-) m6A 3'UTR       25683224//25456834//24981863//22608085
chr5:118191139-118191140(-) m6A 3'UTR       25683224//25456834//24981863//22608085
chr5:118191251-118191252(-) m6A 3'UTR       24981863//22608085
chr5:118191308-118191309(-) m6A 3'UTR       24981863//22608085
chr5:118191345-118191346(-) m6A 3'UTR       24981863//22608085
chr5:118191461-118191462(-) m6A 3'UTR       -
chr5:118191469-118191470(-) m6A 3'UTR       -
chr5:118191489-118191490(-) m6A 3'UTR       24981863
chr5:118191544-118191545(-) m6A 3'UTR       24981863//22608085
chr5:118191609-118191610(-) m6A 3'UTR       25683224//24981863//25569111//26404942//22608085
chr5:118191687-118191688(-) m6A 3'UTR       25683224//24981863//25569111//26404942
chr5:118191699-118191700(-) m6A 3'UTR       25683224//24981863//26404942
chr5:118191708-118191709(-) m6A 3'UTR       25683224//24981863//26404942
chr5:118191730-118191731(-) m6A 3'UTR       24981863//26404942
chr5:118191783-118191784(-) m6A 3'UTR       24981863
chr5:118191795-118191796(-) m6A 3'UTR       24981863
chr5:118191936-118191937(-) m6A 3'UTR       24981863//22608085
chr5:118192077-118192078(-) m6A 3'UTR       24981863
chr5:118192145-118192146(-) m6A 3'UTR       24981863
chr5:118192172-118192173(-) m6A 3'UTR       24981863
chr5:118192381-118192382(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr5:118192396-118192397(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr5:118192421-118192422(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr5:118192510-118192511(-) m6A 3'UTR       25683224//24981863//22608085
chr5:118192539-118192540(-) m6A 3'UTR       25683224//24981863
chr5:118192670-118192671(-) m6A 3'UTR       25683224//24981863//22608085
chr5:118192795-118192796(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr5:118192841-118192842(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr5:118192892-118192893(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr5:118193123-118193124(-) m6A 3'UTR       25456834//24981863//25569111//22608085
chr5:118193233-118193234(-) m6A 3'UTR       25456834//24981863//25569111//22608085
chr5:118193347-118193348(-) m6A 3'UTR       25456834//25412662//24981863//25569111//22608085
chr5:118193471-118193472(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr5:118193483-118193484(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr5:118193525-118193526(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr5:118193628-118193629(-) m6A CDS//exon       25683224//25412662//24981863
chr5:118237012-118237013(-) m6A exon//intron       25456834//24981863//25569111
chr5:118237028-118237029(-) m6A exon//intron       25456834//24981863//25569111
chr5:118237050-118237051(-) m6A exon//intron       25456834//24981863//25569111
chr5:118237064-118237065(-) m6A exon//intron       25456834//24981863//25569111
chr5:118237091-118237092(-) m6A exon//intron       25456834//24981863//25569111
chr5:118237148-118237149(-) m6A CDS//exon       25456834//25412662//24981863//25569111
chr5:118237178-118237179(-) m6A CDS//exon       25456834//25412662//24981863//25569111
chr5:118237234-118237235(-) m6A CDS//exon       25412662//24981863//25569111
chr5:118237268-118237269(-) m6A CDS//exon       25412662//24981863
chr5:118237278-118237279(-) m6A CDS//exon       25412662//24981863
chr5:118242475-118242476(-) m6A CDS//exon       24981863//22608085
chr5:118242920-118242921(-) m6A 5'UTR//exon       24981863
chr5:118242945-118242946(-) m6A 5'UTR       24981863
chr5:118243902-118243903(-) m6A 5'UTR//intron       24981863

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-m01-1
Interactor2: Rnft2

Evidence Support:


Prediction-Evidence cRep//Rep
Support Database RepTar

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