Basic Information:

  VIRBase ID:  

VHID00588923

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-1:  MIMAT0005533          Dnajc28:  NM_001099738     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-1	Dnajc28
miRBase Accession/Entrez ID	MIMAT0005533	246738
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	BC020175//ORF28

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Dnajc28	chr16:91614615-91614616(-) m6A 3'UTR       25412662 chr16:91614656-91614657(-) m6A 3'UTR       25412662 chr16:91614672-91614673(-) m6A 3'UTR       25412662 chr16:91614792-91614793(-) m6A 3'UTR       25412662 chr16:91615268-91615269(-) m6A 3'UTR       24981863 chr16:91615328-91615329(-) m6A 3'UTR       25456834//24981863 chr16:91615375-91615376(-) m6A 3'UTR       25456834//24981863 chr16:91615397-91615398(-) m6A 3'UTR       25456834//24981863 chr16:91615418-91615419(-) m6A 3'UTR       25456834//24981863 chr16:91615438-91615439(-) m6A 3'UTR       25456834 chr16:91615621-91615622(-) m6A 3'UTR       25456834 chr16:91615668-91615669(-) m6A 3'UTR       25456834//24981863//22608085 chr16:91615729-91615730(-) m6A 3'UTR       25456834//24981863//22608085 chr16:91615740-91615741(-) m6A 3'UTR       25456834//24981863//22608085 chr16:91615796-91615797(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr16:91615811-91615812(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr16:91615828-91615829(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr16:91615881-91615882(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr16:91615899-91615900(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr16:91615928-91615929(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr16:91615940-91615941(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr16:91615962-91615963(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr16:91615996-91615997(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr16:91616036-91616037(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr16:91616065-91616066(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr16:91616128-91616129(-) m6A 3'UTR       25683224//25456834//24981863//22608085 chr16:91616230-91616231(-) m6A CDS       25456834//24981863//22608085 chr16:91616258-91616259(-) m6A CDS       25456834//24981863//22608085 chr16:91616288-91616289(-) m6A CDS       25456834//24981863 chr16:91616293-91616294(-) m6A CDS       25456834//24981863 chr16:91616431-91616432(-) m6A CDS       25456834//25412662//24981863 chr16:91616481-91616482(-) m6A CDS       25456834//25412662//24981863//25569111 chr16:91616506-91616507(-) m6A CDS       25456834//25412662//24981863//25569111 chr16:91616560-91616561(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr16:91616623-91616624(-) m6A CDS       25456834//24981863//25569111//22608085//22575960 chr16:91616679-91616680(-) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr16:91616707-91616708(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr16:91616737-91616738(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr16:91616898-91616899(-) m6A CDS       25456834//24981863 chr16:91616918-91616919(-) m6A CDS       25456834//24981863 chr16:91617259-91617260(-) m6A CDS       24981863//22608085 chr16:91617312-91617313(-) m6A CDS       24981863//22608085 chr16:91617329-91617330(-) m6A CDS       24981863//22608085 chr16:91617346-91617347(-) m6A CDS       24981863//22608085 chr16:91618736-91618737(-) m6A 5'UTR//intron       25412662 chr16:91618777-91618778(-) m6A 5'UTR//intron       25412662

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-1
Interactor2: Dnajc28

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar