Basic Information:

  VIRBase ID:  

VHID00588575

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-1:  MIMAT0005533          Lrp4:  NM_172668     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-1	Lrp4
miRBase Accession/Entrez ID	MIMAT0005533	228357
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	6430526J12Rik//D230026E03//mdi//mdig//Megf7

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Lrp4	chr2:91457583-91457584(+) m6A 5'UTR//exon       24981863//25569111 chr2:91457610-91457611(+) m6A 5'UTR//exon       25412662//24981863//25569111 chr2:91457658-91457659(+) m6A 5'UTR//exon       25412662//24981863//25569111 chr2:91471236-91471237(+) m6A CDS//exon       25683224//22608085 chr2:91471251-91471252(+) m6A CDS//exon       25683224//22608085 chr2:91473180-91473181(+) m6A CDS//exon       25683224//22608085 chr2:91473234-91473235(+) m6A CDS//exon       25683224//22608085 chr2:91473267-91473268(+) m6A CDS//exon       25683224//22608085 chr2:91473925-91473926(+) m6A CDS//exon       25683224//22608085 chr2:91473991-91473992(+) m6A CDS//exon       25683224//22608085 chr2:91476385-91476386(+) m6A CDS//exon       25683224//25412662 chr2:91476604-91476605(+) m6A CDS//exon       25683224//25412662 chr2:91477145-91477146(+) m6A CDS//exon       25683224//25412662 chr2:91477679-91477680(+) m6A CDS//exon       25683224 chr2:91477759-91477760(+) m6A exon//intron       25683224 chr2:91477802-91477803(+) m6A exon//intron       25683224 chr2:91477952-91477953(+) m6A exon//intron       25683224//25456834 chr2:91478092-91478093(+) m6A exon//intron       25683224//25456834 chr2:91478211-91478212(+) m6A exon//intron       25683224//25456834//25569111 chr2:91478550-91478551(+) m6A CDS//exon       25683224 chr2:91481863-91481864(+) m6A CDS       25683224//22608085 chr2:91481875-91481876(+) m6A CDS       25683224//22608085 chr2:91481920-91481921(+) m6A CDS       25683224//22608085 chr2:91485789-91485790(+) m6A CDS       25683224//22608085 chr2:91485905-91485906(+) m6A CDS       25683224//22608085 chr2:91485950-91485951(+) m6A CDS       25683224//22608085 chr2:91485955-91485956(+) m6A CDS       25683224//22608085 chr2:91486159-91486160(+) m6A CDS       25683224//22608085 chr2:91487044-91487045(+) m6A CDS       25683224//22608085 chr2:91487082-91487083(+) m6A CDS       25683224//22608085 chr2:91487101-91487102(+) m6A CDS       25683224//22608085 chr2:91487119-91487120(+) m6A CDS       25683224//22608085 chr2:91488444-91488445(+) m6A CDS       25683224//22608085 chr2:91488520-91488521(+) m6A CDS       25683224//22608085 chr2:91492416-91492417(+) m6A CDS       25683224//25412662//22608085 chr2:91492544-91492545(+) m6A CDS       25683224//25412662//22608085 chr2:91492592-91492593(+) m6A CDS       25683224//25412662//22608085 chr2:91492665-91492666(+) m6A CDS       25683224//25412662 chr2:91494861-91494862(+) m6A CDS       25683224//22608085 chr2:91494869-91494870(+) m6A CDS       25683224//22608085 chr2:91494890-91494891(+) m6A CDS       25683224//22608085 chr2:91494939-91494940(+) m6A CDS       25683224//22608085 chr2:91496931-91496932(+) m6A CDS       25683224//25412662 chr2:91496944-91496945(+) m6A CDS       25683224//25412662 chr2:91496966-91496967(+) m6A CDS       25683224//25412662 chr2:91496981-91496982(+) m6A CDS       25683224//25412662 chr2:91496992-91496993(+) m6A CDS       25683224//25412662 chr2:91497344-91497345(+) m6A CDS       25683224//22608085 chr2:91497374-91497375(+) m6A CDS       25683224//22608085 chr2:91502014-91502015(+) m6A CDS       25683224//25412662//22608085 chr2:91506007-91506008(+) m6A CDS       25683224//25412662//22608085 chr2:91506034-91506035(+) m6A CDS       25683224//25412662//22608085 chr2:91508506-91508507(+) m6A CDS       25683224//22608085 chr2:91511433-91511434(+) m6A CDS       25683224//24981863//25569111 chr2:91511575-91511576(+) m6A CDS       25683224//25412662//24981863//25569111 chr2:91511626-91511627(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:91511711-91511712(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:91511724-91511725(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:91511810-91511811(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr2:91511904-91511905(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr2:91511928-91511929(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr2:91511939-91511940(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr2:91511971-91511972(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr2:91511989-91511990(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr2:91512127-91512128(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr2:91512172-91512173(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:91512193-91512194(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:91512222-91512223(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:91512274-91512275(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:91512307-91512308(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr2:91512360-91512361(+) m6A 3'UTR       25683224//25412662//24981863//25569111//22608085 chr2:91513607-91513608(+) m6A 3'UTR       25683224//25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-1
Interactor2: Lrp4

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar