Basic Information:

  VIRBase ID:  

VHID00588519

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-1:  MIMAT0005533          Trpm6:  NR_157571     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-1	Trpm6
miRBase Accession/Entrez ID	MIMAT0005533	225997
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	CHAK//CHAK2//TRPM6/CHAK2

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Trpm6	chr19:18853969-18853970(+) m6A CDS       25569111 chr19:18854004-18854005(+) m6A CDS       25569111 chr19:18854012-18854013(+) m6A CDS       25569111 chr19:18854042-18854043(+) m6A CDS       24981863//25569111 chr19:18854046-18854047(+) m6A CDS       25569111 chr19:18854061-18854062(+) m6A CDS       24981863//25569111 chr19:18854066-18854067(+) m6A CDS       24981863//25569111 chr19:18854159-18854160(+) m6A CDS       24981863//25569111 chr19:18854185-18854186(+) m6A CDS       24981863//25569111 chr19:18854218-18854219(+) m6A CDS       24981863//25569111 chr19:18854264-18854265(+) m6A CDS       25456834//25412662//24981863//25569111 chr19:18854295-18854296(+) m6A CDS       25456834//25412662//24981863//25569111 chr19:18854313-18854314(+) m6A CDS       25456834//25412662//24981863//25569111 chr19:18854343-18854344(+) m6A CDS       24981863//25412662//25569111 chr19:18854350-18854351(+) m6A CDS       24981863//25412662//25569111 chr19:18892096-18892097(+) m6A CDS       25683224//24981863 chr19:18892199-18892200(+) m6A 3'UTR       25683224//24981863//25569111//22608085 chr19:18892205-18892206(+) m6A 3'UTR       25683224//24981863//25569111//22608085 chr19:18892260-18892261(+) m6A 3'UTR       25683224//24981863//25569111//22608085

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-1
Interactor2: Trpm6

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar