Basic Information:

  VIRBase ID:  

VHID00588399

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-1:  MIMAT0005533          Utp6:  NM_144826     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-1	Utp6
miRBase Accession/Entrez ID	MIMAT0005533	216987
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	4732497O03Rik//HCA6//HCA66

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Utp6	chr11:79934106-79934107(-) m6A 3'UTR//intron       24981863 chr11:79934225-79934226(-) Y 3'UTR//exon//intron       26075521 chr11:79934770-79934771(-) m6A 3'UTR//intron       25456834 chr11:79934949-79934950(-) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111 chr11:79935051-79935052(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111 chr11:79935146-79935147(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085 chr11:79935229-79935230(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085 chr11:79935273-79935274(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085 chr11:79935355-79935356(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085 chr11:79935549-79935550(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085//22575960 chr11:79935588-79935589(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085//22575960 chr11:79935680-79935681(-) m6A 3'UTR//intron       25456834//24981863//25569111//22608085 chr11:79935691-79935692(-) m6A 3'UTR//intron       25456834//24981863//25569111//22608085 chr11:79935705-79935706(-) m6A 3'UTR//intron       25456834//24981863//25569111//22608085 chr11:79935981-79935982(-) m6A CDS//exon       24981863//25569111 chr11:79936008-79936009(-) m6A CDS//exon       24981863//25569111 chr11:79936044-79936045(-) m6A CDS//exon       24981863//25569111 chr11:79936051-79936052(-) m6A CDS//exon       24981863//25569111 chr11:79936059-79936060(-) m6A CDS//exon       24981863//25569111 chr11:79936075-79936076(-) m6A CDS//exon       24981863//25569111 chr11:79937684-79937685(-) m6A CDS//exon       25412662//24981863//25569111 chr11:79937725-79937726(-) m6A CDS//exon       25412662//24981863//22608085 chr11:79937742-79937743(-) m6A CDS//exon       25412662//24981863//22608085 chr11:79942145-79942146(-) m6A CDS//exon       22608085 chr11:79943333-79943334(-) m6A CDS       25569111//22608085 chr11:79943349-79943350(-) m6A CDS       25569111//22608085 chr11:79943387-79943388(-) m6A CDS       25569111//22608085 chr11:79948972-79948973(-) m6A CDS       24981863//22608085 chr11:79948987-79948988(-) m6A CDS       24981863//22608085 chr11:79960765-79960766(-) m6A CDS//exon       - chr11:79960781-79960782(-) m6A CDS//exon       25569111 chr11:79962240-79962241(-) m6A CDS//exon       24981863//25569111 chr11:79962258-79962259(-) m6A CDS//exon       24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-1
Interactor2: Utp6

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar