Basic Information:

  VIRBase ID:  

VHID00588169

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-1:  MIMAT0005533          Igf2bp1:  NM_009951     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-1	Igf2bp1
miRBase Accession/Entrez ID	MIMAT0005533	140486
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	AL024068//AW549074//Crd//CRD-//CRD-BP//Crdbp//D030026A21Rik//D11Moh4//D11Moh40//D11Moh40e//D11Moh45//IM//IMP//IMP-1//IMP1//mir-3063//Neilsen//Zbp//ZBP-1//Zbp1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Igf2bp1	chr11:95957261-95957262(-) m6A 3'UTR       25683224 chr11:95957295-95957296(-) m6A 3'UTR       25683224 chr11:95957385-95957386(-) m6A 3'UTR       25683224 chr11:95957426-95957427(-) m6A 3'UTR       25683224 chr11:95957505-95957506(-) m6A 3'UTR       25683224 chr11:95960287-95960288(-) m6A 3'UTR       - chr11:95960410-95960411(-) m6A 3'UTR       25683224 chr11:95960493-95960494(-) m6A 3'UTR       25683224 chr11:95960503-95960504(-) m6A 3'UTR       25683224 chr11:95960511-95960512(-) m6A 3'UTR       25683224 chr11:95960527-95960528(-) m6A 3'UTR       25683224 chr11:95961326-95961327(-) m6A 3'UTR       25683224 chr11:95961357-95961358(-) m6A 3'UTR       25683224 chr11:95961414-95961415(-) m6A 3'UTR       25683224 chr11:95961448-95961449(-) m6A 3'UTR       25683224 chr11:95961554-95961555(-) m6A 3'UTR       25683224 chr11:95961925-95961926(-) m6A 3'UTR       25683224 chr11:95962290-95962291(-) m6A 3'UTR       25683224 chr11:95962874-95962875(-) m6A 3'UTR       25683224 chr11:95963336-95963337(-) m6A 3'UTR       25683224//25569111 chr11:95963447-95963448(-) m6A 3'UTR//exon       25683224//25412662//24981863//25456834//25569111 chr11:95963454-95963455(-) m6A 3'UTR//exon       25683224//25412662//24981863//25456834//25569111 chr11:95963532-95963533(-) m6A CDS//exon       25683224//25412662//24981863//25456834//25569111 chr11:95963569-95963570(-) m6A CDS//exon       25683224//24981863//25569111 chr11:95966194-95966195(-) m6A CDS//exon       25683224 chr11:95966235-95966236(-) m6A CDS//exon       25683224 chr11:95966240-95966241(-) m6A CDS//exon       25683224 chr11:95966273-95966274(-) m6A CDS//exon       25683224 chr11:95966709-95966710(-) m6A CDS//exon       25683224 chr11:95966758-95966759(-) m6A CDS//exon       25683224 chr11:95967569-95967570(-) m6A CDS//exon       25683224//24981863 chr11:95967607-95967608(-) m6A CDS//exon       25683224//24981863 chr11:95969921-95969922(-) m6A CDS       25683224 chr11:95969949-95969950(-) m6A CDS       25683224//25412662//24981863 chr11:95969975-95969976(-) m6A CDS       25683224//25412662//24981863 chr11:95970695-95970696(-) m6A CDS       25683224//25412662//24981863 chr11:95970708-95970709(-) m1A CDS       26863196 chr11:95970716-95970717(-) m6A CDS       25683224//25412662//24981863 chr11:95973053-95973054(-) m6A CDS       25683224//25412662 chr11:95975266-95975267(-) m6A CDS//exon       25683224 chr11:95975305-95975306(-) m6A CDS//exon       25683224 chr11:95975319-95975320(-) m6A CDS//exon       25683224 chr11:95978402-95978403(-) m6A exon//intron       25683224 chr11:95978418-95978419(-) m6A exon//intron       25683224 chr11:95979054-95979055(-) m6A exon//intron       25683224 chr11:95979089-95979090(-) m6A exon//intron       25683224 chr11:95979121-95979122(-) m6A exon//intron       25683224 chr11:95979150-95979151(-) m6A exon//intron       25683224 chr11:95979158-95979159(-) m6A exon//intron       25683224 chr11:95979191-95979192(-) m6A exon//intron       25683224 chr11:95979214-95979215(-) m6A exon//intron       25683224 chr11:95979271-95979272(-) m6A exon//intron       25683224 chr11:95979292-95979293(-) m6A CDS//exon       25683224 chr11:95981054-95981055(-) m6A exon//intron       25683224 chr11:95981109-95981110(-) m6A exon//intron       25683224 chr11:95982504-95982505(-) m6A exon//intron       25683224//24981863 chr11:95982584-95982585(-) m6A exon//intron       25683224 chr11:96004227-96004228(-) m6A CDS       25683224 chr11:96004245-96004246(-) m6A CDS       25683224 chr11:96004272-96004273(-) m6A CDS       25683224 chr11:96005467-96005468(-) m6A CDS       25683224 chr11:96005583-96005584(-) m6A CDS       25569111 chr11:96005628-96005629(-) m6A CDS       25569111 chr11:96005660-96005661(-) m6A 5'UTR       25412662//25569111 chr11:96005772-96005773(-) m6A 5'UTR       25412662//25456834//25569111 chr11:96005826-96005827(-) m6A 5'UTR       25412662//24981863//25456834//25569111 chr11:96005903-96005904(-) m6A 5'UTR       25412662//24981863//25456834//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Igf2bp1	Leading edge of the lamellipodium Embryo fibroblast cells (NIH-3T3)     10875929 Leading edge of the perinuclear Embryo fibroblast cells (NIH-3T3)     10875929

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-1
Interactor2: Igf2bp1

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar