Basic Information:

  VIRBase ID:  

VHID00588085

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-1:  MIMAT0005533          Ciapin1:  NM_134141     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-1	Ciapin1
miRBase Accession/Entrez ID	MIMAT0005533	109006
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	2810413N20Rik//a//AA617265//anamorsin//AU021794

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Ciapin1	chr8:94821639-94821640(-) m6A 3'UTR       24981863 chr8:94821657-94821658(-) m6A 3'UTR       24981863 chr8:94822411-94822412(-) m6A 3'UTR       25683224//22608085 chr8:94822428-94822429(-) m6A 3'UTR       25683224//22608085 chr8:94822480-94822481(-) m6A 3'UTR       25683224//22608085 chr8:94822757-94822758(-) m6A 3'UTR       25456834//24981863//25569111 chr8:94822854-94822855(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr8:94822899-94822900(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr8:94822915-94822916(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr8:94822999-94823000(-) m6A 3'UTR//exon       25412662//24981863//25456834//25569111//22608085 chr8:94823090-94823091(-) m6A 3'UTR//exon       25683224//25412662//24981863//25456834//22608085 chr8:94823709-94823710(-) m6A 3'UTR//CDS//exon       25683224//22608085 chr8:94826669-94826670(-) m6A CDS//exon//intron       25683224//22608085 chr8:94831781-94831782(-) m6A CDS//exon//intron       22608085 chr8:94831791-94831792(-) m6A CDS//exon//intron       22608085 chr8:94832578-94832579(-) m6A CDS//exon//intron       24981863//25569111 chr8:94832621-94832622(-) m6A CDS//exon//intron       24981863//25569111 chr8:94834467-94834468(-) m6A exon//intron       24981863//25456834//25569111 chr8:94834472-94834473(-) m6A exon//intron       24981863//25456834//25569111 chr8:94838302-94838303(-) m6A 5'UTR       25412662//24981863//25456834 chr8:94838335-94838336(-) m6A 5'UTR       25412662//24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Ciapin1	Cytoplasm Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-1
Interactor2: Ciapin1

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar