Basic Information:

  VIRBase ID:  

VHID00588070

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-1:  MIMAT0005533          Rnf144a:  NM_080563     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-1	Rnf144a
miRBase Accession/Entrez ID	MIMAT0005533	108089
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	Rnf1//Rnf144//Ubce7ip4//UI//UIP4

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Rnf144a	chr12:26307760-26307761(-) m6A 3'UTR       25683224//22608085 chr12:26307784-26307785(-) m6A 3'UTR       25683224//22608085 chr12:26310152-26310153(-) m6A 3'UTR       25456834//24981863//22608085 chr12:26310166-26310167(-) m6A 3'UTR       25456834//24981863//22608085 chr12:26310215-26310216(-) m6A 3'UTR       25456834//25412662//24981863//25569111//22608085 chr12:26310254-26310255(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr12:26310316-26310317(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr12:26310326-26310327(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr12:26310349-26310350(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr12:26310406-26310407(-) m6A 3'UTR       25683224//25456834//25412662//24981863//22608085 chr12:26310581-26310582(-) m6A 3'UTR       24981863//22608085 chr12:26320955-26320956(-) m6A CDS       25683224//22608085 chr12:26320985-26320986(-) m6A CDS       25683224//22608085 chr12:26327561-26327562(-) m6A CDS       25683224//22608085 chr12:26327598-26327599(-) m6A CDS       25683224//22608085 chr12:26339408-26339409(-) m6A CDS       25683224//22608085 chr12:26389439-26389440(-) m6A 5'UTR       25683224//22608085 chr12:26389447-26389448(-) m6A 5'UTR       25683224//22608085 chr12:26405345-26405346(-) m6A 5'UTR//intron       25412662 chr12:26415104-26415105(-) m6A 5'UTR       25412662 chr12:26415114-26415115(-) m6A 5'UTR       25412662//24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Rnf144a	Cytoplasm Neuroblastoma cell line (N2A)     22406755 Cytoplasm Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-1
Interactor2: Rnf144a

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar