Basic Information:

  VIRBase ID:  

VHID00587970

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-1:  MIMAT0005533          Snx25:  NM_001372343     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-1	Snx25
miRBase Accession/Entrez ID	MIMAT0005533	102141
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	AI661919//Gm1699//Gm173//SBBI//Sbbi31

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Snx25	chr8:46033472-46033473(-) m6A 3'UTR//exon       24981863 chr8:46033502-46033503(-) m6A 3'UTR//exon       24981863//26404942 chr8:46033555-46033556(-) m6A 3'UTR//exon       24981863//26404942 chr8:46033585-46033586(-) m6A 3'UTR//exon       24981863//26404942 chr8:46034413-46034414(-) m6A CDS//exon//intron       25412662//24981863//22608085 chr8:46034427-46034428(-) m6A CDS//exon//intron       25412662//24981863//22608085 chr8:46034479-46034480(-) m6A CDS//exon//intron       25412662//22608085 chr8:46035545-46035546(-) m6A CDS//exon//intron       25412662//22608085 chr8:46049402-46049403(-) m6A CDS//exon//intron       25683224//22608085 chr8:46068191-46068192(-) m6A CDS//exon//intron       25683224//24981863//22608085 chr8:46068213-46068214(-) m6A CDS//exon//intron       25683224//24981863//22608085 chr8:46151833-46151834(-) m6A CDS       25412662 chr8:46151879-46151880(-) m6A CDS       25412662 chr8:46151964-46151965(-) m6A CDS       25412662 chr8:46152067-46152068(-) m6A CDS       25412662

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Snx25	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-1
Interactor2: Snx25

Evidence Support:

Prediction-Evidence	Rep
Support Database	RepTar