Basic Information:

  VIRBase ID:  

VHID00587807

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-1:  MIMAT0005533          Sp2:  NM_001363226     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-1	Sp2
miRBase Accession/Entrez ID	MIMAT0005533	78912
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	4930480I16Rik//mKIAA0048

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Sp2	chr11:96953523-96953524(-) m6A 3'UTR       24981863//25456834//25569111 chr11:96953536-96953537(-) m6A 3'UTR       24981863//25456834//25569111 chr11:96953551-96953552(-) m6A 3'UTR       24981863//25456834//25569111 chr11:96953631-96953632(-) m6A 3'UTR       25683224//24981863//25456834//25569111 chr11:96953643-96953644(-) m6A 3'UTR       25683224//24981863//25456834//25569111 chr11:96953897-96953898(-) m6A 3'UTR       24981863//25569111 chr11:96953933-96953934(-) m6A 3'UTR       24981863//25569111 chr11:96954036-96954037(-) m6A 3'UTR       24981863//25456834//25569111 chr11:96954185-96954186(-) m6A 3'UTR       25683224//25456834//24981863//25569111 chr11:96954206-96954207(-) m6A 3'UTR       25683224//25456834//24981863//25569111 chr11:96954252-96954253(-) m6A 3'UTR       25683224//25456834//24981863//25569111 chr11:96954328-96954329(-) m6A 3'UTR       25683224//25456834//24981863//25569111 chr11:96954400-96954401(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111 chr11:96954436-96954437(-) m6A 3'UTR       25683224//25456834//25412662//25569111 chr11:96954495-96954496(-) m6A CDS       25683224//25412662//25569111 chr11:96954566-96954567(-) m6A CDS       25569111 chr11:96955783-96955784(-) m6A CDS       25569111 chr11:96955900-96955901(-) m6A CDS       25569111 chr11:96955912-96955913(-) m6A CDS       25569111 chr11:96955923-96955924(-) m6A CDS       25569111 chr11:96957595-96957596(-) m6A CDS       24981863 chr11:96957686-96957687(-) m6A CDS       25683224//25412662//24981863 chr11:96957702-96957703(-) m6A CDS       25683224//25412662//24981863 chr11:96961052-96961053(-) m6A CDS       25683224//25412662//24981863//25569111 chr11:96961060-96961061(-) m6A CDS       25683224//25412662//24981863//25569111 chr11:96961074-96961075(-) m6A CDS       25683224//25412662//24981863//25569111 chr11:96961251-96961252(-) m6A CDS       25683224//25412662//24981863//25569111 chr11:96961272-96961273(-) m6A CDS       25683224//25412662//24981863//25456834//25569111 chr11:96961282-96961283(-) m6A CDS       25683224//25412662//24981863//25456834//25569111 chr11:96961348-96961349(-) m1A CDS       26863196 chr11:96961369-96961370(-) m6A CDS       25683224//24981863//25456834//25569111 chr11:96961434-96961435(-) m6A CDS       24981863//25569111 chr11:96961663-96961664(-) m6A CDS       24981863//25569111 chr11:96961674-96961675(-) m6A CDS       24981863//25569111 chr11:96961746-96961747(-) m6A CDS       25569111 chr11:96961880-96961881(-) m6A CDS       24981863//25569111 chr11:96961895-96961896(-) m6A CDS       24981863//25569111 chr11:96968615-96968616(-) m6A 5'UTR//intron       24981863 chr11:96968619-96968620(-) m6A 5'UTR//intron       25412662//24981863//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Sp2	Cytoplasm Neuroblastoma cell line (N2A)     22406755 Cytoplasm Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-1
Interactor2: Sp2

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar