Basic Information:

  VIRBase ID:  

VHID00587658

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-1:  MIMAT0005533          Rprd2:  NM_001368181     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-1	Rprd2
miRBase Accession/Entrez ID	MIMAT0005533	75137
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	2810036A19Rik//4930535B03Rik//6720469I21Rik//AL022841//AL022940//AU021304//BB077382//mKIAA0460

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Rprd2	chr3:95761335-95761336(-) m6A 3'UTR       24981863//25456834 chr3:95761365-95761366(-) m6A 3'UTR       24981863//25569111 chr3:95761444-95761445(-) m6A 3'UTR       25569111 chr3:95762008-95762009(-) m6A 3'UTR       25683224//25412662//24981863//25569111 chr3:95762075-95762076(-) m6A 3'UTR       24981863//25412662//25569111 chr3:95762128-95762129(-) m6A 3'UTR       24981863//25412662//25569111 chr3:95762175-95762176(-) m6A 3'UTR       24981863 chr3:95762978-95762979(-) m6A 3'UTR       24981863 chr3:95763012-95763013(-) m6A 3'UTR       24981863 chr3:95763055-95763056(-) m6A 3'UTR       24981863 chr3:95763653-95763654(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr3:95763751-95763752(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:95763773-95763774(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:95763806-95763807(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:95763995-95763996(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr3:95764003-95764004(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr3:95764035-95764036(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr3:95764058-95764059(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:95764185-95764186(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr3:95764201-95764202(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr3:95764310-95764311(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr3:95764435-95764436(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:95764545-95764546(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr3:95764681-95764682(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:95764722-95764723(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:95764776-95764777(-) m6A CDS       25683224//25456834//24981863//25412662//25569111//22608085//22575960 chr3:95764817-95764818(-) m6A CDS       25683224//25456834//24981863//25412662//25569111//22608085//22575960 chr3:95764842-95764843(-) m6A CDS       25683224//25456834//24981863//25412662//25569111//22608085//22575960 chr3:95764858-95764859(-) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr3:95764904-95764905(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:95764947-95764948(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:95765141-95765142(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:95765154-95765155(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:95765266-95765267(-) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr3:95765327-95765328(-) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr3:95765339-95765340(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:95765476-95765477(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr3:95765537-95765538(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:95765588-95765589(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:95765789-95765790(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:95765838-95765839(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:95765865-95765866(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:95765912-95765913(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:95765969-95765970(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:95765975-95765976(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:95766163-95766164(-) m6A CDS       24981863//25569111 chr3:95772124-95772125(-) m6A CDS//exon       24981863 chr3:95772850-95772851(-) m6A 3'UTR//intron       25456834//24981863 chr3:95772858-95772859(-) m6A 3'UTR//intron       25456834//24981863 chr3:95772865-95772866(-) m6A 3'UTR//intron       25456834//24981863 chr3:95772968-95772969(-) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111 chr3:95773029-95773030(-) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111 chr3:95773057-95773058(-) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111 chr3:95773171-95773172(-) m6A 3'UTR//intron       25456834 chr3:95773181-95773182(-) m6A 3'UTR//intron       25456834 chr3:95774182-95774183(-) m6A CDS//exon       24981863//22608085 chr3:95780507-95780508(-) m6A CDS       24981863 chr3:95780584-95780585(-) m6A CDS       24981863 chr3:95818599-95818600(-) m6A CDS//exon       25569111 chr3:95818760-95818761(-) m6A 5'UTR//exon       24981863//25569111 chr3:95818779-95818780(-) m6A exon       24981863//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Rprd2	Exosome Mast cells     17486113

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-1
Interactor2: Rprd2

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar