Basic Information:

  VIRBase ID:  

VHID00587313

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-1:  MIMAT0005533          Srsf11:  NM_001379533     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-1	Srsf11
miRBase Accession/Entrez ID	MIMAT0005533	69207
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	0610009J05Rik//2610019N13Rik//BF642805//Sfr//Sfrs11

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Srsf11	chr3:158011538-158011539(-) m6A 3'UTR//exon       25569111//22608085 chr3:158011620-158011621(-) m6A 3'UTR//exon       24981863//25569111 chr3:158011768-158011769(-) m6A 3'UTR//exon       24981863//25569111 chr3:158011897-158011898(-) m6A 3'UTR//exon       24981863//25569111//26404942//22608085 chr3:158012027-158012028(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr3:158012106-158012107(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr3:158012131-158012132(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr3:158012358-158012359(-) m6A CDS//exon       25683224//25456834//25412662//24981863//22608085 chr3:158012418-158012419(-) m6A CDS//exon//intron       25683224//25456834//25412662//24981863//22608085 chr3:158012447-158012448(-) m6A CDS//exon//intron       25683224//25456834//25412662//24981863 chr3:158012471-158012472(-) m6A exon//intron       25683224//25412662//24981863//25456834 chr3:158012504-158012505(-) m6A exon//intron       25683224//25412662//24981863 chr3:158012919-158012920(-) m6A exon//intron       25683224//25412662//24981863 chr3:158012973-158012974(-) m6A exon//intron       25683224//24981863 chr3:158014000-158014001(-) m6A CDS//exon//intron       25683224//25412662//24981863 chr3:158014038-158014039(-) m6A CDS//exon//intron       25683224//25412662//24981863 chr3:158017814-158017815(-) m6A CDS//exon       25683224//25412662//24981863 chr3:158017831-158017832(-) m6A CDS//exon       25683224//25412662//24981863 chr3:158017868-158017869(-) m6A CDS//exon       25412662//24981863 chr3:158017890-158017891(-) m6A CDS//exon       25412662//24981863 chr3:158017953-158017954(-) m6A exon//intron       25412662//24981863 chr3:158017980-158017981(-) m6A exon//intron       25412662//24981863 chr3:158017996-158017997(-) m6A exon//intron       25412662//24981863 chr3:158023571-158023572(-) m6A exon//intron       24981863 chr3:158023778-158023779(-) m6A exon//intron       25412662 chr3:158031998-158031999(-) m6A 5'UTR//intron       25412662//24981863//25569111 chr3:158032030-158032031(-) m6A 5'UTR//intron       25412662//24981863//25456834//25569111 chr3:158036318-158036319(-) m6A intron       25569111 chr3:158036525-158036526(-) m6A 5'UTR//CDS//exon       25412662//24981863//25456834//25569111 chr3:158036572-158036573(-) m6A 5'UTR//CDS//exon       25412662//24981863//25456834//25569111//22575960 chr3:158036580-158036581(-) m6A 5'UTR//CDS//exon       25412662//24981863//25456834//25569111//22575960

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Srsf11	Nucleus Neuroblastoma cell line (N2A)     22406755 Nucleus Neuroblastoma cell line (N2A)     22406755 Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-1
Interactor2: Srsf11

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar