Basic Information:

  VIRBase ID:  

VHID00587265

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-1:  MIMAT0005533          Smim14:  NM_001376971     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m01-1	Smim14
miRBase Accession/Entrez ID	MIMAT0005533	68552
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	1110003E01Rik//1700127H04Rik//5430439C17Rik//MAd//MAd4

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Smim14	chr5:65868562(-) A-I      intronic chr5:65850594(-) A-I      intronic chr5:65854243(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Smim14	chr5:65447154-65447155(-) m6A 3'UTR       24981863 chr5:65447161-65447162(-) m6A 3'UTR       24981863 chr5:65449188-65449189(-) m6A 3'UTR       24981863//25569111//22575960 chr5:65449210-65449211(-) m6A 3'UTR       24981863//25569111//22575960 chr5:65449283-65449284(-) m6A 3'UTR       25683224//24981863//25569111//22608085 chr5:65449289-65449290(-) m6A 3'UTR       25683224//24981863//25569111//22608085 chr5:65449329-65449330(-) m6A 3'UTR       25683224//24981863//25569111//22608085 chr5:65449356-65449357(-) m6A 3'UTR       25683224//24981863//25569111 chr5:65449366-65449367(-) m6A 3'UTR       25683224//24981863 chr5:65450160-65450161(-) m6A 3'UTR//exon       24981863//22608085 chr5:65450408-65450409(-) m6A 3'UTR//CDS//exon       24981863//22608085 chr5:65453023-65453024(-) m6A exon//intron       25412662//22608085 chr5:65468419-65468420(-) m6A CDS//exon       24981863//25569111//22608085 chr5:65492834-65492835(-) m6A 5'UTR//exon//intron       25412662//24981863//25569111//22608085 chr5:65493044-65493045(-) m6A 5'UTR//exon//intron       24981863 chr5:65493106-65493107(-) m6A 5'UTR//exon//intron       24981863//25569111 chr5:65493127-65493128(-) m6A 5'UTR//exon//intron       24981863//25569111 chr5:65493155-65493156(-) m6A 5'UTR//exon//intron       24981863//25569111 chr5:65493163-65493164(-) m6A 5'UTR//exon//intron       24981863//25569111 chr5:65493185-65493186(-) m6A 5'UTR//exon//intron       24981863//25569111 chr5:65493197-65493198(-) m6A 5'UTR//exon//intron       24981863//25569111 chr5:65493254-65493255(-) m6A 5'UTR//exon//intron       24981863//25569111 chr5:65493280-65493281(-) m6A 5'UTR//exon//intron       24981863//25569111 chr5:65536860-65536861(-) m6A 5'UTR//exon       24981863 chr5:65536889-65536890(-) m6A 5'UTR//exon       24981863 chr5:65536944-65536945(-) m6A 5'UTR//exon       24981863 chr5:65536951-65536952(-) m6A 5'UTR//exon       24981863 chr5:65537024-65537025(-) m6A 5'UTR//exon       25683224//24981863 chr5:65537045-65537046(-) m6A 5'UTR//exon       25683224//24981863

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m01-1
Interactor2: Smim14

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar