Detail Information

Basic Information:


  VIRBase ID:  

VHID00587198

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m01-1:           Derl1:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-m01-1 Derl1
miRBase
Accession/Entrez ID
MIMAT0005533 67819
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - 1110021N07Rik//AI195141//AW551338//Derl//Derlin-1

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Derl1
chr15:57869989-57869990(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr15:57870033-57870034(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr15:57870066-57870067(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr15:57870129-57870130(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22575960
chr15:57870146-57870147(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22575960
chr15:57870907-57870908(-) m6A 3'UTR       24981863
chr15:57870935-57870936(-) m6A 3'UTR       24981863
chr15:57871005-57871006(-) m6A 3'UTR       25683224//24981863//25569111
chr15:57871079-57871080(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr15:57871122-57871123(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr15:57871144-57871145(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr15:57871288-57871289(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr15:57871360-57871361(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr15:57871431-57871432(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr15:57871523-57871524(-) m6A 3'UTR       25683224//25456834//24981863//25412662//25569111//22608085
chr15:57871550-57871551(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr15:57871631-57871632(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr15:57871667-57871668(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr15:57871774-57871775(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr15:57871806-57871807(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr15:57875535-57875536(-) m6A CDS       25569111//22608085
chr15:57875583-57875584(-) m6A CDS       25569111//22608085
chr15:57883497-57883498(-) m6A CDS       25569111//22608085
chr15:57892278-57892279(-) m6A CDS       25412662//24981863//25569111//22608085
chr15:57892287-57892288(-) m6A CDS       25412662//24981863//25569111//22608085

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-m01-1
Interactor2: Derl1

Evidence Support:


Prediction-Evidence cRep//Rep
Support Database RepTar

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